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Marker Overview
| Name | BNL1669 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1669_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)32 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1669_F: AAAGGGATATTGGGTGTGCA |
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| Primer 2 | BNL1669_R: TCGAGCATGTGCTCATTGAT |
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| Polymorphism | P_ BNL1669 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | 3-79 x NM24016, RIL (2008) | AD_ch26_Dt.12 | N/A | 35.5 | BNL1669b | View |
| 2 | TM-1 x 3-79, RIL (2012) | AD_ch26_Dt.12 | N/A | 33.43 | BNL1669b | View |
| 3 | TM-1 x 3-79, RIL (2014) | AD_ch26_Dt.12 | N/A | 43.4 | BNL1669b | View |
| 4 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch26_Dt.12 | N/A | 31.5 | BNL1669b | View |
| 5 | Monsanto SSR Bin Map, (2009) | AD_ch26_Dt.12 | N/A | 81 | BNL1669b | View |
| 6 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch26_Dt.12 | N/A | 106.4 | BNL1669 | View |
| 7 | Emian-22 x 3-79, BC1 (2011) | AD_ch26_Dt.12 | N/A | 28.23 | BNL1669 | View |
| 8 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch26_Dt.12 | N/A | 84.16 | BNL1669 | View |
| 9 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch26_Dt.12 | N/A | 38.6 | BNL1669 | View |
| 10 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A12 | N/A | 49.6 | BNL1669 | View |
| 11 | AD-genome wide Reference Map (2009) | AD_ch10_At.10 | N/A | 153 | BNL1669 | View |
| 12 | AD-genome wide Reference Map (2009) | AD_ch26_Dt.12 | N/A | 56 | BNL1669 | View |
| 13 | DH962 x Jinmian-6, F2 (2009) | AD_ch26_Dt.12 | N/A | 101.4 | BNL1669 | View |
| 14 | DH962 x Jinmian-6, F2 (2009) | AD_ch26_Dt.12 | N/A | 101.4 | BNL1669 | View |
| 15 | DH962 X Ji Mian 5, F2 (2015) | AD_ch26_Dt.12 | N/A | 97.13 | BNL1669 | View |
| 16 | W10 x TM-1, F2:3 (2015) | AD_ch12_At.12 | N/A | 0 | BNL1669 | View |
| 17 | DH962 x Ji Mian 5, RIL (2015) | AD_ch26_Dt.12 | N/A | 81.4 | BNL1669 | View |
| 18 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch26_Dt.12 | N/A | 132.1 | BNL1669a | View |
| 19 | TM-1 x 3-79, RIL (2012) | AD_ch10_At.10 | N/A | 59.42 | BNL1669a | View |
| 20 | TM-1 x 3-79, RIL (2014) | AD_ch10_At.10 | N/A | 62.1 | BNL1669a | View |
| 21 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch15_Dt.01 | N/A | 28.5 | BNL1669a | View |
| 22 | Monsanto SSR Bin Map, (2009) | AD_ch10_At.10 | N/A | 61 | BNL1669a | View |
| 23 | TM-1 x Hai-7124, BC1 (2008) | AD_ch26_Dt.12 | N/A | 57.95 | BNL1669-170 | View |
| 24 | TM-1 x Hai-7124, BC1 (2007) | AD_ch26_Dt.12 | N/A | 56 | BNL1669-170 | View |
| 25 | TM-1 x Hai-7124, BC1 (2012) | AD_ch26_Dt.12 | N/A | 46.9 | BNL1669-170 | View |
| 26 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch10_At.10 | N/A | 120.5 | BNL1669-120 | View |
| 27 | TM-1 x 3-79, RIL (2012.v3) | AD_ch10_At.10 | N/A | 62.08 | BNL1669a | View |
| 28 | TM-1 x 3-79, RIL (2012.v3) | AD_ch26_Dt.12 | N/A | 43.39 | BNL1669b | View |
| 29 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch26_Dt.12 | N/A | 60.8 | BNL1669 | View |
Sequence
>BNL1669 ID=BNL1669; Name=BNL1669; organism=Gossypium hirsutum; type=genetic_marker; length=169bp
AAAGGGATATTGGGTGTGCATTACAAGGCACTTAATGATTAATTACATAA
GGGTATGTGCTAAAAAAAGTACCTATGTGGAAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTA
TCAATGAGCACATGCTCGA
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