CIR0241, CIR0241 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0241
AliasCIR241
Genbank IDAJ567186
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567186
Source Typegenomic
Repeat Motif(AC)16
PCR ConditionAnnealing temperature: 55
Primer 1CIR241_F: TCTTGTTTACATTCCCTTC
Primer 2CIR241_R: CGTGTTGTTTATCCGTC
Product Length258
PolymorphismP_ CIR0241
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567186
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567186AJ567186Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Deltapine-61 x Texas-701, F2 (2007)AD_ch01_At.01N/A0CIR241-243View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch01_At.01N/A195CIR241View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch01_At.01N/A106.27CIR241View
4AD-genome wide Reference Map (2009)AD_ch01_At.01N/A61cir0241View
Sequence
>CIR0241 ID=CIR0241; Name=CIR0241; organism=Gossypium hirsutum; type=genetic_marker; length=258bp
TCTTGTTTACATTCCCTTCTTTATACCGTTTCTCTGCAAGAAAAACACAC
ACACACACACACACACACACACACACAAAAGAAAAAAAAAGTAGGANAGA
GAGGAAAACGAGGNACACGGTTAATTTATGAAACAAATTAAAGGGAAAAA
CAAAAGAACGAAGGAGAAAAAAAAAAACGTTTATTTTTCTTAAAAAATAT
TATTTTTTGGAAGAGTTCGCCTTTTGCTGGCAACCTTAATAGACGGATAA
ACAACACG