TX-0379

Germplasm Overview


Name	TX-0379
Alias	CB 2132 [view all 5]
GRIN ID	PI 163603
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Guatemala
Origin Detail	Guatemala, Santa Rosa
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 64]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2132
MW4
PI 163603
TEX 379
TX 379

Phenotypic Data

Total 64 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	leaf size	medium	MX_CLM_TCM_2012	V-0266
2	NCGC germplasm evaluation, T12	lint color	off white	MX_CLM_TCM_2012	V-0266
3	NCGC germplasm evaluation, T12	photoperiod	no squares	MX_CLM_TCM_2012	V-0266
4	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0266
5	NCGC germplasm evaluation, T12	plot maturity	not flowering	MX_CLM_TCM_2012	V-0266
6	NCGC germplasm evaluation, T12	population homogeneity	mix	MX_CLM_TCM_2012	V-0266
7	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012	V-0266
8	NCGC germplasm evaluation, T12	stigma exsertion	protruding	MX_CLM_TCM_2012	V-0266
9	NCGC germplasm evaluation, T12	trichome density on leaf	none	MX_CLM_TCM_2012	V-0266
10	NCGC germplasm evaluation, T12	trichome density on stem	none	MX_CLM_TCM_2012	V-0266
11	NCGC germplasm evaluation, T12	plant height (m)	0.76	MX_CLM_TCM_2012	V-0266
12	NCGC germplasm evaluation, T12	leaf nectaries	one, main vein	MX_CLM_TCM_2012	V-0266
13	NCGC germplasm evaluation, T12	plot plant stand	0.75	MX_CLM_TCM_2012	V-0266
14	NCGC germplasm evaluation, T12	productiveness	no production	MX_CLM_TCM_2012	V-0266

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
2	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
3	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	191\|191	dpl0618_191; dpl0618_191
4	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
5	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|123	nau2277_123; nau2277_123
6	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198	bnl3985_169; bnl3985_198
7	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	165\|175\|179\|188	cir0218_165; cir0218_175; cir0218_179; cir0218_188
8	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	161\|167	jespr0291_161; jespr0291_167
9	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	169\|189	tmb1648_169; tmb1648_189
10	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
11	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	242\|242	dpl0405_242; dpl0405_242
12	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	150\|150	jespr0065_150; jespr0065_150
13	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171\|174	gh537_168; gh537_171; gh537_174
14	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	134\|136	cir0169_134; cir0169_136
15	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	225\|225	cir0081_225; cir0081_225
16	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	202\|233\|239	tmb2295_202; tmb2295_233; tmb2295_239
17	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	112\|128\|190	bnl3545_112; bnl3545_128; bnl3545_190
18	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|221	mghes0076_192; mghes0076_221
19	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|219	cir0165_207; cir0165_219
20	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	238\|238	dpl0039_238; dpl0039_238
21	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	74\|74	gh495_74; gh495_74
22	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	214\|214	mghes0029_214; mghes0029_214
23	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	236\|253	tmb2018_236; tmb2018_253
24	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|165	jespr0220_127; jespr0220_165
25	NCGC_SNTD_SSR_genotype_2015	bnl4017	genetic_marker	221\|225\|235	bnl4017_221; bnl4017_225; bnl4017_235

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0258	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0271	A/G	A
3	TAMU_SNP63K_genotype	USDA_SNP0278	G/T	-
4	TAMU_SNP63K_genotype	USDA_SNP0286	A/G	G
5	TAMU_SNP63K_genotype	USDA_SNP0290	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0291	A/C	C
7	TAMU_SNP63K_genotype	USDA_SNP0298	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0304	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0306	C/T	-
10	TAMU_SNP63K_genotype	USDA_SNP0314	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0323	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0324	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0332	C/T	T
14	TAMU_SNP63K_genotype	USDA_SNP0337	C/T	C
15	TAMU_SNP63K_genotype	USDA_SNP0338	C/T	-
16	TAMU_SNP63K_genotype	USDA_SNP0357	A/G	A
17	TAMU_SNP63K_genotype	USDA_SNP0361	C/T	T
18	TAMU_SNP63K_genotype	USDA_SNP0363	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0365	C/T	-
20	TAMU_SNP63K_genotype	USDA_SNP0368	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0370	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0377	A/G	G
23	TAMU_SNP63K_genotype	USDA_SNP0379	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0382	A/G	A
25	TAMU_SNP63K_genotype	USDA_SNP0385	A/C	-

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0379
GRIN	PI 163603

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163603	GRIN:
NCGC Cotton Race Collection (USA)	TX-0379

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