TX-0379 | Cottongen

Germplasm Overview

Cross References

Phenotypic Data

Snp Genotype Data

Ssr Genotype Data

Germplasm Overview


Name	TX-0379
Alias	CB 2132 [view all 5]
GRIN ID	PI 163603
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Guatemala
Origin Detail	Guatemala, Santa Rosa
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 64]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2132
MW4
PI 163603
TEX 379
TX 379

Phenotypic Data

Phenotypic Data

Total 64 trait scores

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#	Dataset	Descriptor	Value	Environment	Replication	Plot
1	NCGC germplasm evaluation, T12	leaf size	medium	MX_CLM_TCM_2012		V-0266
2	NCGC germplasm evaluation, T12	lint color	off white	MX_CLM_TCM_2012		V-0266
3	NCGC germplasm evaluation, T12	photoperiod	no squares	MX_CLM_TCM_2012		V-0266
4	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012		V-0266
5	NCGC germplasm evaluation, T12	plot maturity	not flowering	MX_CLM_TCM_2012		V-0266
6	NCGC germplasm evaluation, T12	population homogeneity	mix	MX_CLM_TCM_2012		V-0266
7	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012		V-0266
8	NCGC germplasm evaluation, T12	stigma exsertion	protruding	MX_CLM_TCM_2012		V-0266
9	NCGC germplasm evaluation, T12	trichome density on leaf	none	MX_CLM_TCM_2012		V-0266
10	NCGC germplasm evaluation, T12	trichome density on stem	none	MX_CLM_TCM_2012		V-0266
11	NCGC germplasm evaluation, T12	plant height (m)	0.76	MX_CLM_TCM_2012		V-0266
12	NCGC germplasm evaluation, T12	leaf nectaries	one, main vein	MX_CLM_TCM_2012		V-0266
13	NCGC germplasm evaluation, T12	plot plant stand	0.75	MX_CLM_TCM_2012		V-0266
14	NCGC germplasm evaluation, T12	productiveness	no production	MX_CLM_TCM_2012		V-0266

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl1227	genetic_marker	161\|177	bnl1227_161; bnl1227_177
2	NCGC_SNTD_SSR_genotype_2015	bnl1047	genetic_marker	150\|158	bnl1047_150; bnl1047_158
3	NCGC_SNTD_SSR_genotype_2015	tmb1356	genetic_marker	201\|240	tmb1356_201; tmb1356_240
4	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|230	dpl0717_230; dpl0717_230

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_002205	G/A	A
2	TAMU_SNP63K_genotype	UCD_Gh_M_002230	C/T	C
3	TAMU_SNP63K_genotype	UCD_Gh_M_002269	G/A	G
4	TAMU_SNP63K_genotype	UCD_Gh_M_002274	C/T	T
5	TAMU_SNP63K_genotype	UCD_Gh_M_002301	A/G	G
6	TAMU_SNP63K_genotype	UCD_Gh_M_002332	A/G	G
7	TAMU_SNP63K_genotype	UCD_Gh_M_002334	T/C	C
8	TAMU_SNP63K_genotype	UCD_Gh_M_002338	C/A	A
9	TAMU_SNP63K_genotype	UCD_Gh_M_002339	G/T	T
10	TAMU_SNP63K_genotype	UCD_Gh_M_002366	T/C	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_002380	C/A	A
12	TAMU_SNP63K_genotype	UCD_Gh_M_002390	G/A	G
13	TAMU_SNP63K_genotype	UCD_Gh_M_002400	T/C	T
14	TAMU_SNP63K_genotype	UCD_Gh_M_002418	C/A	A
15	TAMU_SNP63K_genotype	UCD_Gh_M_002474	A/G	A
16	TAMU_SNP63K_genotype	UCD_Gh_M_002481	G/A	A
17	TAMU_SNP63K_genotype	UCD_Gh_M_002531	T/C	C
18	TAMU_SNP63K_genotype	UCD_Gh_M_002539	C/T	C
19	TAMU_SNP63K_genotype	UCD_Gh_M_002571	T/C	T
20	TAMU_SNP63K_genotype	UCD_Gh_M_002573	A/G	G
21	TAMU_SNP63K_genotype	UCD_Gh_M_002600	C/T	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_002629	T/G	G
23	TAMU_SNP63K_genotype	UCD_Gh_M_002662	C/T	C
24	TAMU_SNP63K_genotype	UCD_Gh_M_002679	A/G	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_002694	G/T	G

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0379
GRIN	PI 163603

In Collection

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163603	GRIN:
NCGC Cotton Race Collection (USA)	TX-0379