TX-0379

Germplasm Overview


Name	TX-0379
Alias	CB 2132 [view all 5]
GRIN ID	PI 163603
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Guatemala
Origin Detail	Guatemala, Santa Rosa
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 64]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2132
MW4
PI 163603
TEX 379
TX 379

Phenotypic Data

Total 64 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	leaf size	medium	MX_CLM_TCM_2012	V-0266
2	NCGC germplasm evaluation, T12	lint color	off white	MX_CLM_TCM_2012	V-0266
3	NCGC germplasm evaluation, T12	photoperiod	no squares	MX_CLM_TCM_2012	V-0266
4	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0266
5	NCGC germplasm evaluation, T12	plot maturity	not flowering	MX_CLM_TCM_2012	V-0266
6	NCGC germplasm evaluation, T12	population homogeneity	mix	MX_CLM_TCM_2012	V-0266
7	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012	V-0266
8	NCGC germplasm evaluation, T12	stigma exsertion	protruding	MX_CLM_TCM_2012	V-0266
9	NCGC germplasm evaluation, T12	trichome density on leaf	none	MX_CLM_TCM_2012	V-0266
10	NCGC germplasm evaluation, T12	trichome density on stem	none	MX_CLM_TCM_2012	V-0266
11	NCGC germplasm evaluation, T12	plant height (m)	0.76	MX_CLM_TCM_2012	V-0266
12	NCGC germplasm evaluation, T12	leaf nectaries	one, main vein	MX_CLM_TCM_2012	V-0266
13	NCGC germplasm evaluation, T12	plot plant stand	0.75	MX_CLM_TCM_2012	V-0266
14	NCGC germplasm evaluation, T12	productiveness	no production	MX_CLM_TCM_2012	V-0266

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	142\|142	bnl2443_142; bnl2443_142
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	115\|115	bnl1495_115; bnl1495_115
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	189\|189	bnl2495_189; bnl2495_189
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	109\|111	gh283_109; gh283_111
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	143\|160	bnl3992_143; bnl3992_160
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|134\|140	bnl1531_116; bnl1531_121; bnl1531_134; bnl1531_140
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|190\|194	bnl3644_185; bnl3644_190; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|180	bnl3371_168; bnl3371_180
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	117\|117	nau2140_117; nau2140_117
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|194	dpl0135_156; dpl0135_194
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|197	bnl0256_182; bnl0256_197
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	176\|178	tmb0043_176; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	149\|149	bnl2960_149; bnl2960_149
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	195\|201	tmb0836_195; tmb0836_201
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	214\|216	bnl3441_214; bnl3441_216
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	201\|201	bnl3580_201; bnl3580_201
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	190\|190	bnl1231_190; bnl1231_190
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|206\|234	bnl3594_182; bnl3594_206; bnl3594_234
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	172\|172	tmb1421_172; tmb1421_172
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	178\|178	bnl4061_178; bnl4061_178
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	346\|346	bnl3650_346; bnl3650_346
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|189	bnl3474_180; bnl3474_189
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|206	tmb0083_206; tmb0083_206

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	-
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	C
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	G
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	C

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0379
GRIN	PI 163603

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163603	GRIN:
NCGC Cotton Race Collection (USA)	TX-0379

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