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Marker Overview
| Name | BNL1495 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1495_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)14 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1495_F: TGAAGATTTGGAGGCAATTG |
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| Primer 2 | BNL1495_R: ATAAATGGCATCAGCCCAAA |
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| Polymorphism | P_ BNL1495 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Image
| File Name | Legend |
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| 45_FISH_GEN-178-1117_fig2.jpg | BAC clones and their corresponding genetic markers of the 22 probes according to FISH signal patterns in Figure 1. [Image from Wang et al., 2008, GEN-178-1117] |
| 48_FISH_TAG-115-675.jpg | Twenty-six individual cotton mitotic chromosomes with FISH signals derived from the chromosome-speciWc BACs, and comparisons of linkage and FISH maps. [Image from Wang 2007, TAG-115-675] |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch13_At.13 | N/A | 96.2 | BNL1495 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch13_At.13 | N/A | 107.41 | BNL1495 | View |
| 3 | TM-1 x 3-79, RIL (2006) | AD_ch18_Dt.13 | N/A | 33.7 | BNL1495 | View |
| 4 | TM-1 x 3-79, RIL (2012) | AD_ch13_At.13 | N/A | 56.78 | BNL1495 | View |
| 5 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch13_At.13 | N/A | 163.5 | BNL1495 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 119 | BNL1495 | View |
| 7 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 53.5 | BNL1495 | View |
| 8 | TM-1 x 3-79, RIL (2014) | AD_ch13_At.13 | N/A | 53.4 | BNL1495 | View |
| 9 | W10 x TM-1, F2:3 (2015) | AD_ch13_At.13 | N/A | 25.6 | BNL1495 | View |
| 10 | GX1135 x GX100-2, F2 (2013) | AD_ch13_At.13 | N/A | 127.8 | BNL1495 | View |
| 11 | GX1135 x GX100-2, RIL (2016) | AD_ch13_At.13 | N/A | 73.4 | BNL1495 | View |
| 12 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch13_At.13 | N/A | 106.4 | BNL1495 | View |
| 13 | Monsanto SSR Bin Map, (2009) | AD_ch13_At.13 | N/A | 101 | BNL1495 | View |
| 14 | LMY22 x LY343, RIL (2020) | A13 | N/A | 118.57 | BNL1495 | View |
| 15 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch13_At.13 | N/A | 2 | BNL1495-113 | View |
| 16 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch13_At.13 | N/A | 52.5 | BNL1495-120 | View |
| 17 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 68.2 | BNL1495-120 | View |
| 18 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 68.56 | BNL1495-120 | View |
| 19 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 68.6 | BNL1495-120 | View |
| 20 | TM-1 x 3-79, RIL (2012.v3) | AD_ch13_At.13 | N/A | 53.37 | BNL1495 | View |
Sequence
>BNL1495 ID=BNL1495; Name=BNL1495; organism=Gossypium hirsutum; type=genetic_marker; length=128bp
TGAAGATTTGGAGGCAATTGTCTTAAAGGGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGGATAATTATCTTATACACTGTCAGTGGAGTAAAGAAACTCTA
CAAACGCGTTTGGGCTGATGCCATTTAT
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