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Map Overview
Name | GX1135 x GX100-2, RIL (2016) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapMaker 3.0 |
Map type | genetic |
Population type | RIL |
Population size | 177 |
Genome group | AD |
Map unit | cM |
Maternal parent | GX1135 |
Paternal parent | GX100-2 |
Population size | 177 |
Number of loci | 622 |
Number of QTL | 198 |
Number of linkage groups | 57 |
Publication | [view all] |
Contact | Hua, Jin-Ping
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Map Loci
This map contains 622 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10912 | SWU10912 | marker_locus | 0 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | DPL0090 | DPL0090 | marker_locus | 16.3 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | Gh398 | Gh398 | marker_locus | 22.2 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10930 | SWU10930 | marker_locus | 22.2 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | ICR03295 | ICR03295 | marker_locus | 24.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | CGR6129 | CGR6129 | marker_locus | 24.9 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | DPL0790 | DPL0790 | marker_locus | 32.2 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10954 | SWU10954 | marker_locus | 32.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | NAU4045 | nau4045 | marker_locus | 32.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10959 | SWU10959 | marker_locus | 33.3 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | NAU3177 | NAU3177 | marker_locus | 34.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | ICR03724 | ICR03724 | marker_locus | 37.6 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | ICR03725 | ICR03725 | marker_locus | 40.7 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10987 | SWU10987 | marker_locus | 47.8 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU10986 | SWU10986 | marker_locus | 47.9 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | NAU2218 | NAU2218 | marker_locus | 77 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU11191 | SWU11191 | marker_locus | 99.3 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | BNL2827 | BNL2827b | marker_locus | 103.1 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU11204 | SWU11204 | marker_locus | 103.1 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | BNL2827 | BNL2827a | marker_locus | 103.8 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | NAU6367 | NAU6367 | marker_locus | 116.3 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | MUSS0422 | MUSS422 | marker_locus | 120.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU11309 | SWU11309 | marker_locus | 120.4 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | SWU11374 | SWU11374 | marker_locus | 122.7 cM |
GX1135 x GX100-2, RIL (2016).GG-RIL.16_chr01-1 | NAU3385 | nau3385 | marker_locus | 122.7 cM |
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Map QTL
This map contains 198 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-1 | qFEL.GG-RIL_ch02-1.hd12 | QTL | 5.3 cM | 7.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-1 | qFEL.GG-RIL_ch02-1.xy12-bc.1 | QTL | 57.9 cM | 64.4 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-1 | qFEL.GG-RIL_ch02-1.xy12-bc.2 | QTL | 65.5 cM | 65.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-1 | qFEL.GG-RIL_ch02-1.xy12-bc.3 | QTL | 65.7 cM | 92.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-2 | qFEL.GG-RIL_ch02-2.hd12.1 | QTL | 84.5 cM | 85.3 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-2 | qFEL.GG-RIL_ch02-2.hd12.2 | QTL | 84.5 cM | 85.3 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-2 | qFEL.GG-RIL_ch02-2.hd12.3 | QTL | 92.1 cM | 93.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFEL.GG-RIL_ch05.hd12-bc.1 | QTL | 114.1 cM | 114.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFEL.GG-RIL_ch05.hd12.1 | QTL | 114.1 cM | 114.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFEL.GG-RIL_ch05.hd12.2 | QTL | 114.1 cM | 114.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFEL.GG-RIL_ch05.hd12-bc.2 | QTL | 123.5 cM | 128.1 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFEL.GG-RIL_ch05.xy12 | QTL | 114.1 cM | 114.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr06 | qFEL.GG-RIL_ch06.xy12 | QTL | 97.3 cM | 103.3 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr10 | qFEL.GG-RIL_ch10.xy12 | QTL | 7.8 cM | 8.9 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr11 | qFEL.GG-RIL_ch11.hd12-bc | QTL | 28.9 cM | 71.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr18-1 | qFEL.GG-RIL_ch18-1.xy12 | QTL | 36.4 cM | 77.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr01-1 | qFS.GG-RIL_ch01-1.hd12 | QTL | 40.7 cM | 47.8 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr01-1 | qFS.GG-RIL_ch01-1.xy12-bc | QTL | 124.2 cM | 156.5 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-2 | qFS.GG-RIL_ch02-2.hd12-bc | QTL | 86.2 cM | 92.1 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr02-2 | qFS.GG-RIL_ch02-2.hd12 | QTL | 92.1 cM | 93.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr04-1 | qFS.GG-RIL_ch04-1.cz12-bc | QTL | 7.5 cM | 36.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr04-1 | qFS.GG-RIL_ch04-1.hd12 | QTL | 2.6 cM | 3.5 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFS.GG-RIL_ch05.cz12 | QTL | 14.9 cM | 31.3 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFS.GG-RIL_ch05.hd12.1 | QTL | 31.3 cM | 54.7 cM | - |
GX1135 x GX100-2, RIL (2016).GG-RIL_chr05 | qFS.GG-RIL_ch05.hd12-bc | QTL | 114.1 cM | 114.9 cM | - |
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Stock
Name | Type | Details |
GX1135 x GX100-2, RIL | population | Secondary id: | cdbpop_000152 | Origin detail: | China | Population size: | 177 | Alias: | GG-RIL | Alias: | XZ hybrid RIL | Pedigree: | GX1135 / GX100-2 |
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Publication
Year | Publications |
2016 | Shang L, Wang Y, Wang X, Liu F, Abduweli A, Cai S, Li Y, Ma L, Wang K, Hua J. Genetic Analysis and Stable QTL Detection on Fiber Quality Traits Using Two Recombinant Inbred Line Populations and Their Backcross Progeny in Upland Cotton. G3 (Bethesda, Md.). 2016 Jun 24. |
2016 | Shang L, Abduweli A, Wang Y, Hua J. Genetic analysis and QTL mapping of oil content and seed index using two recombinant inbred lines and two backcross populations in upland cotton. Plant Breeding. 2016 Dec 12; 135:224–231. |
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