TX-0379

Germplasm Overview


Name	TX-0379
Alias	CB 2132 [view all 5]
GRIN ID	PI 163603
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Guatemala
Origin Detail	Guatemala, Santa Rosa
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 64]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2132
MW4
PI 163603
TEX 379
TX 379

Phenotypic Data

Total 64 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T07	trichome density on leaf	none	MX_CLM_TCM_2007	173
2	NCGC germplasm evaluation, T07	E1 (%)	5.3	MX_CLM_TCM_2007	173
3	NCGC germplasm evaluation, T07	FUI (%)	79.9	MX_CLM_TCM_2007	173
4	NCGC germplasm evaluation, T07	MIC (unit)	4.3	MX_CLM_TCM_2007	173
5	NCGC germplasm evaluation, T07	SFC HVI (%)	9.7	MX_CLM_TCM_2007	173
6	NCGC germplasm evaluation, T07	T1 (g/tex)	24.4	MX_CLM_TCM_2007	173
7	NCGC germplasm evaluation, T07	UHML (inch)	1.04	MX_CLM_TCM_2007	173
8	NCGC germplasm evaluation, T07	plot plant stand	9 plants	MX_CLM_TCM_2007	173
9	NCGC germplasm evaluation, T09	leaf color	green	MX_CLM_TCM_2009	94
10	NCGC germplasm evaluation, T09	leaf gossypol glands	heavy	MX_CLM_TCM_2009	94
11	NCGC germplasm evaluation, T09	leaf shape	normal	MX_CLM_TCM_2009	94
12	NCGC germplasm evaluation, T09	lint color	cream	MX_CLM_TCM_2009	94
13	NCGC germplasm evaluation, T09	plot maturity	flowering	MX_CLM_TCM_2009	94
14	NCGC germplasm evaluation, T09	stem gossypol glands	heavy	MX_CLM_TCM_2009	94
15	NCGC germplasm evaluation, T09	stigma exsertion	protruding	MX_CLM_TCM_2009	94
16	NCGC germplasm evaluation, T09	trichome density on leaf	none	MX_CLM_TCM_2009	94
17	NCGC germplasm evaluation, T09	trichome density on stem	none	MX_CLM_TCM_2009	94
18	NCGC germplasm evaluation, T09	plant height (m)	1.07	MX_CLM_TCM_2009	94
19	NCGC germplasm evaluation, T09	leaf nectaries	one, main vein	MX_CLM_TCM_2009	94
20	NCGC germplasm evaluation, T09	plot plant stand	1 plant	MX_CLM_TCM_2009	94
21	NCGC germplasm evaluation, T09	productiveness	<12 per plant	MX_CLM_TCM_2009	94
22	NCGC germplasm evaluation, T12	canopy type	typical	MX_CLM_TCM_2012	V-0266
23	NCGC germplasm evaluation, T12	leaf color	green	MX_CLM_TCM_2012	V-0266
24	NCGC germplasm evaluation, T12	leaf gossypol glands	heavy	MX_CLM_TCM_2012	V-0266
25	NCGC germplasm evaluation, T12	leaf shape	normal	MX_CLM_TCM_2012	V-0266

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	158\|190	dpl0071_158; dpl0071_190
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	197\|197	bnl1673_197; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	216\|236	bnl3090_216; bnl3090_236
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	235\|235	cir0320_235; cir0320_235
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	116\|125	dpl0249_116; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	189\|195	mghes0022_189; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	200\|200	bnl4028_200; bnl4028_200
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	135\|135	bnl1897_135; bnl1897_135
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|140	dpl0570_126; dpl0570_140
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	155\|180	tmb1427_155; tmb1427_180
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	96\|96	cir0105_96; cir0105_96
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|176	cir0253_154; cir0253_176
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	142\|152	tmb2068_142; tmb2068_152
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	235\|235	bnl2570_235; bnl2570_235
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246	cir0347_236; cir0347_246
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	222\|227	cir0009_222; cir0009_227
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	140\|140	bnl0530_140; bnl0530_140
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	94\|94	bnl0409_94; bnl0409_94
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|160	dpl0196_135; dpl0196_160
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	141\|152	bnl1521_141; bnl1521_152
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|226\|248	tmb1640_196; tmb1640_200; tmb1640_226; tmb1640_248
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|224	dpl0541_206; dpl0541_224

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0379
GRIN	PI 163603

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163603	GRIN:
NCGC Cotton Race Collection (USA)	TX-0379

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