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Marker Overview
| Name | CIR0320 |
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| Alias | CIR320
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| Genbank ID | AJ567260 |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Guazuncho-2 |
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| Source Sequence | AJ567260
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| Source Type | genomic |
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| Repeat Motif | (T)9(N)2(TG)8 |
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| PCR Condition | Annealing temperature: 51 |
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| Primer 1 | CIR320_F: CCTCCATAAACCCTCTT |
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| Primer 2 | CIR320_R: TCACATACGAAGACAACC |
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| Product Length | 241 |
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| Polymorphism | P_ CIR0320 |
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| Publication | [view all] |
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| Comment | Primer data obtained in 2005 |
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Cross References
External references for this genetic_marker
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch07_At.07 | N/A | 212 | CIR320 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch07_At.07 | N/A | 112.96 | CIR320 | View |
| 3 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch07_At.07 | N/A | 74.48 | CIR320 | View |
| 4 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A01 | N/A | 60.8 | CIR320 | View |
| 5 | TM-1 x 3-79, RIL (2012) | AD_ch07_At.07 | N/A | 22.24 | CIR320 | View |
| 6 | TM-1 x 3-79, RIL (2014) | AD_ch07_At.07 | N/A | 117.1 | CIR320 | View |
| 7 | 0-153 x sGK9708, RIL (2016) | AD_ch14_Dt.02 | N/A | 71.5 | CIR320 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch07_At.07 | N/A | 193 | cir0320 | View |
| 9 | Yumian-1 x T586, RIL (2006) | AD_ch07_At.07 | N/A | 29.1 | CIR320a | View |
| 10 | Yumian-1 x T586, RIL (2015) | AD_ch07_At.07 | N/A | 17.4 | CIR320a | View |
| 11 | Yumian-1 x T586, RIL (2006) | AD_ch14_Dt.02 | N/A | 44.8 | CIR320b | View |
| 12 | Yumian-1 x T586, RIL (2015) | AD_ch14_Dt.02 | N/A | 118.9 | CIR320b | View |
| 13 | Yumian-1 x T586, RIL (2009) | AD_ch07_At.07 | N/A | 29.8 | CIR320/230t(C7) | View |
| 14 | Yumian-1 x T586, RIL (2009) | AD_ch14_Dt.02 | N/A | 46.1 | CIR320/300y(C7) | View |
| 15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch07_At.07 | N/A | 117.08 | CIR320 | View |
Sequence
>CIR0320 ID=CIR0320; Name=CIR0320; organism=Gossypium hirsutum; type=genetic_marker; length=241bp
CCTCCATAAACCCTCTTTTATTTCCTTTTTTTCTTTAACTCTGTATGCTC
CCCCAAGATATTCTTTCAAAAAAAAATGGTGATTGCTGAGTGCTCAACAA
CAAGAGAATGTGAAGTTTTTTTTTGTTGTGTGTGTGTGTGTGTNAATTGN
TGGANAATCATTCAATAACCTGAAGAAAGCCAAAATTTCAGGGTTTTTTA
TTGGAGAACAATTCCTGATAAGTGGTTGTCTTCGTATGTGA
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