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Marker Overview
| Name | BNL4017 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL4017_orig
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| Source Type | genomic |
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| Repeat Motif | (TG)11 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL4017_F: CATGTGCTTCGCAGTTGATT |
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| Primer 2 | BNL4017_R: CAGTGTCCCTCACCATCCTT |
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| Polymorphism | P_ BNL4017 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch03_At.03 | N/A | 14.2 | BNL4017 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch03_At.03 | N/A | 110.56 | BNL4017 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 157 | BNL4017 | View |
| 4 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch03_At.03 | N/A | 24.7 | BNL4017 | View |
| 5 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch03_At.03 | N/A | 96.6 | BNL4017 | View |
| 6 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch03_At.03 | N/A | 44.9 | BNL4017 | View |
| 7 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch03_At.03 | N/A | 48 | BNL4017-232 | View |
| 8 | TM-1 x 3-79, RIL (2012) | AD_ch03_At.03 | N/A | 39.66 | BNL4017b | View |
| 9 | TM-1 x 3-79, RIL (2014) | AD_ch03_At.03 | N/A | 76.7 | BNL4017b | View |
| 10 | Monsanto SSR Bin Map, (2009) | AD_ch03_At.03 | N/A | 141 | BNL4017b | View |
| 11 | TM-1 x 3-79, RIL (2012) | AD_ch14_Dt.02 | N/A | 47.69 | BNL4017a | View |
| 12 | TM-1 x 3-79, RIL (2014) | AD_ch14_Dt.02 | N/A | 78.7 | BNL4017a | View |
| 13 | Monsanto SSR Bin Map, (2009) | AD_ch14_Dt.02 | N/A | 61 | BNL4017a | View |
| 14 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch03_At.03 | N/A | 62.1 | BNL4017 | View |
| 15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch03_At.03 | N/A | 76.71 | BNL4017b | View |
| 16 | TM-1 x 3-79, RIL (2012.v3) | AD_ch14_Dt.02 | N/A | 78.73 | BNL4017a | View |
Sequence
>BNL4017 ID=BNL4017; Name=BNL4017; organism=Gossypium hirsutum; type=genetic_marker; length=232bp
CATGTGCTTCGCAGTTGATTTATCTGGATGAGGACTATTAAAGCTGACAA
GTTGGTGGAATTTATAAGGTTGGAGGTCAAAGAATGGTTCCTTGCAAATC
TTGCTAATGAAAGTGAGATTGGGATATACGTTTTGGAATAATAATGAGAT
TTTTTTTTGTGTGTGTGTGTGTGTGTGTGTACTCATTTTATTAAGACAAG
ATTTTGATGGGGAAGGATGGTGAGGGACACTG
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