MGHES0029, MGHES0029 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMGHES0029
AliasMGHES29
MGHES-29
MGHES-029
Genbank IDAW187478
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceAW187478
Source TypeEST
Repeat Motif(TCA)6; (TCT)3
PCR ConditionAnnealing temperature: 55
Primer 1MGHES29_F: TTTCCATTTTCTCCTGCTTCA
Primer 2MGHES29_R: TCAGCTCATGGGAGCAAATA
Product Length205
PolymorphismP_ MGHES0029
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAW187478
Publications
YearPublication
2004EST-SSR: A new class of genetic markers in cotton.
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AW187478AW187478Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch24_Dt.08N/A99.68MGHES29View
2CCRI-36 x Hai-7124, F2 (2007)AD_ch24_Dt.08N/A182.4MGHES29View
3AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A201mghes0029View
4TM-1 x 3-79, RIL (2012)AD_ch24_Dt.08N/A106.68MGHES029View
5TM-1 x 3-79, RIL (2014)AD_ch24_Dt.08N/A102.1MGHES029View
6TM-1 x 3-79, RIL (2012.v3)AD_ch24_Dt.08N/A112.72MGHES029View
Sequence
>MGHES0029 ID=MGHES0029; Name=MGHES0029; organism=Gossypium hirsutum; type=genetic_marker; length=205bp
TTTCCATTTTCTCCTGCTTCATCTCTTGTTATTGTGAATTTTCTGTTCTT
TTTTTTCTCTCTTTTTTAATTTTATAAATGAATTCAAAATGGGTTTTTCT
TCATCATCATCATCATCATCTTCCTCTCTTCTTCTGTTCTTTGTATAACA
GTCTTTTGTTCAATACGCTGTGTTTTGGGTTCTTCTATTTGCTCCCATGA
GCTGA