Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg20/chr20AAGCAT3AAGCAT3marker_locus49.7 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20BNL3994BNL3994marker_locus66 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20ACGCTA14ACGCTA14marker_locus76.2 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20AGGCAT8AGGCAT8marker_locus82.3 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20ACTTGC8ACTTGC8marker_locus89.9 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20BNL0169BNL169marker_locus101.2 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20AAGCAC1AAGCAC1marker_locus110.5 cM
Acala-44 x Pima S-7, F2 (2004).lg20/chr20ACACTG5ACACTG5marker_locus112.9 cM
Acala-44 x Pima S-7, F2 (2004).lg21/chr18BNL0852BNL852marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg21/chr18pAR0947pAR947marker_locus14.2 cM
Acala-44 x Pima S-7, F2 (2004).lg21/chr18BNL1690BNL1690marker_locus31.2 cM
Acala-44 x Pima S-7, F2 (2004).lg21/chr18AAGCAT5AAGCAT5marker_locus44.5 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09BNL2646BNL2646marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09pARC-15pAR0C15marker_locus20.3 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACTTGC2ACTTGC2marker_locus39.1 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACGCAC4ACGCAC4marker_locus43.5 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACTTGC3ACTTGC3marker_locus55.6 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACGGTG6ACGGTG6marker_locus65.3 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACCCGT2ACCCGT2marker_locus71.2 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACGCTA8ACGCTA8marker_locus74.6 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09BNL4047BNL4047marker_locus76.6 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09BNL3902BNL3902marker_locus82.8 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09ACGCAC13ACGCAC13marker_locus86.2 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09JESPR0180JESPR180marker_locus91.1 cM
Acala-44 x Pima S-7, F2 (2004).lg22/chr09JESPR0205JESPR205marker_locus91.6 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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