Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg16AAGCAG5AAGCAG5marker_locus85.1 cM
Acala-44 x Pima S-7, F2 (2004).lg16ACGGTG4ACGGTG4marker_locus85.5 cM
Acala-44 x Pima S-7, F2 (2004).lg16ACGAGC10ACGAGC10marker_locus85.5 cM
Acala-44 x Pima S-7, F2 (2004).lg16AAGCAT2AAGCAT2marker_locus101.5 cM
Acala-44 x Pima S-7, F2 (2004).lg16ACAGAC6ACAGAC6marker_locus118.5 cM
Acala-44 x Pima S-7, F2 (2004).lg16BNL3034BNL3034marker_locus141.4 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACGCAC2ACGCAC2marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACGTGC6ACGTGC6marker_locus27 cM
Acala-44 x Pima S-7, F2 (2004).lg17JESPR0179JESPR-179marker_locus48 cM
Acala-44 x Pima S-7, F2 (2004).lg17AAGCTA4AAGCTA4marker_locus55.5 cM
Acala-44 x Pima S-7, F2 (2004).lg17AAGGCG9AAGGCG9marker_locus75 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACACTA8ACACTA8marker_locus77.4 cM
Acala-44 x Pima S-7, F2 (2004).lg17AGCCAA4AGCCAA4marker_locus87.8 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACCCTC2ACCCTC2marker_locus95.6 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACACGT12ACACGT12marker_locus101.6 cM
Acala-44 x Pima S-7, F2 (2004).lg17BNL3791BNL3791marker_locus110.5 cM
Acala-44 x Pima S-7, F2 (2004).lg17BNL3590BNL3590marker_locus120.2 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACCACC1ACCACC1marker_locus134.7 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACACAG3ACACAG3marker_locus139.7 cM
Acala-44 x Pima S-7, F2 (2004).lg17AGGCAT5AGGCAT5marker_locus143 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACCCTC1ACCCTC1marker_locus144 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACTCTG7ACTCTG7marker_locus149.2 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACTCTG1ACTCTG1marker_locus154.4 cM
Acala-44 x Pima S-7, F2 (2004).lg17ACAGCG9ACAGCG9marker_locus172.4 cM
Acala-44 x Pima S-7, F2 (2004).lg18/chr01ACCCAC1ACCCAC1marker_locus0 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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