Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACCCTC8ACCCTC8marker_locus39.4 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACTCTG12ACTCTG12marker_locus43.1 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACGCTA2ACGCTA2marker_locus45.6 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACTACC4ACTACC4marker_locus51.9 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACACTG2ACACTG2marker_locus58.1 cM
Acala-44 x Pima S-7, F2 (2004).lg34AAGCTC4AAGCTC4marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg34JESPR0237JESPR237marker_locus15.2 cM
Acala-44 x Pima S-7, F2 (2004).lg34AGGCAT3AGGCAT3marker_locus29.4 cM
Acala-44 x Pima S-7, F2 (2004).lg34JESPR0128JESPR128marker_locus38.9 cM
Acala-44 x Pima S-7, F2 (2004).lg34ACACTA3ACACTA3marker_locus50.4 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACACTA1ACACTA1marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg35AGGCAG2AGGCAG2marker_locus10.9 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCCAG5ACCCAG5marker_locus16.8 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCCGT3ACCCGT3marker_locus26 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCGCG3ACCGCG3marker_locus29 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACACTA6ACACTA6marker_locus29.1 cM
Acala-44 x Pima S-7, F2 (2004).lg35AACCAT4AACCAT4marker_locus34.5 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCCAC2ACCCAC2marker_locus39 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCCAA4ACCCAA4marker_locus40.9 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACACGT10ACACGT10marker_locus40.9 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACGAGC6ACGAGC6marker_locus43.7 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACCCTA4ACCCTA4marker_locus44.6 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACACTG6ACACTG6marker_locus45.6 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACGACC8ACGACC8marker_locus47.6 cM
Acala-44 x Pima S-7, F2 (2004).lg35ACACAC5ACACAC5marker_locus48.2 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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