Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg14/chr04AAGCAG2AAGCAG2marker_locus79.3 cM
Acala-44 x Pima S-7, F2 (2004).lg14/chr04ACACAG6ACACAG6marker_locus93.9 cM
Acala-44 x Pima S-7, F2 (2004).lg15AGTGCG6AGTGCG6marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACGTGC2ACGTGC2marker_locus29.8 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACCCTA6ACCCTA6marker_locus47.7 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACTCTC4ACTCTC4marker_locus57.2 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACCCTG7ACCCTG7marker_locus62 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACTCAG2ACTCAG2marker_locus66.9 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACGCAC6ACGCAC6marker_locus75.3 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACAGAC8ACAGAC8marker_locus85 cM
Acala-44 x Pima S-7, F2 (2004).lg15AAGCTA2AAGCTA2marker_locus90.6 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACCGCG5ACCGCG5marker_locus94.6 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACAGAC9ACAGAC9marker_locus96.1 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACTACC5ACTACC5marker_locus97.3 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACGCTA10ACGCTA10marker_locus101.8 cM
Acala-44 x Pima S-7, F2 (2004).lg15AGGCAT4AGGCAT4marker_locus105.5 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACTCAG4ACTCAG4marker_locus105.5 cM
Acala-44 x Pima S-7, F2 (2004).lg15AAGCAG4AAGCAG4marker_locus109.9 cM
Acala-44 x Pima S-7, F2 (2004).lg15ACTCAC3ACTCAC3marker_locus116 cM
Acala-44 x Pima S-7, F2 (2004).lg16BNL2882BNL2882marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg16ACAGCG1ACAGCG1marker_locus15.9 cM
Acala-44 x Pima S-7, F2 (2004).lg16ACTCTC3ACTCTC3marker_locus32.8 cM
Acala-44 x Pima S-7, F2 (2004).lg16AAGCTC3AAGCTC3marker_locus44.6 cM
Acala-44 x Pima S-7, F2 (2004).lg16JESPR0165JESPR-165marker_locus54 cM
Acala-44 x Pima S-7, F2 (2004).lg16BNL1059BNL1059marker_locus71.9 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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