Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg05AACCTT4AACCTT4marker_locus149.2 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09ACATGC3ACATGC3marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09AACCTG7AACCTG7marker_locus13.2 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09ACAAGC2ACAAGC2marker_locus17.3 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09AAGGCG7AAGGCG7marker_locus22.9 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09AAGGCG1AAGGCG1marker_locus28.1 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09AAGGCG5AAGGCG5marker_locus29.4 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09ACGCAC3ACGCAC3marker_locus37.7 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09ACTGCG1ACTGCG1marker_locus59.6 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09ACCACC6ACCACC6marker_locus72.5 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09BNL2847BNL2847marker_locus88.9 cM
Acala-44 x Pima S-7, F2 (2004).lg06/chr09AGGCTG1AGGCTG1marker_locus107.2 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACGACC4ACGACC4marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AAGCAT1AAGCAT1marker_locus6.5 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACGCTA12ACGCTA12marker_locus21.4 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12BNL3261BNL3261marker_locus37.3 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AGGCAG3AGGCAG3marker_locus54.8 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACCAGC2ACCAGC2marker_locus62.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AACCTG10AACCTG10marker_locus65.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACTGCT2ACTGCT2marker_locus65.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACACTA2ACACTA2marker_locus72.6 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACTCTG8ACTCTG8marker_locus79.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACTCTG10ACTCTG10marker_locus79.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACACGT8ACACGT8marker_locus79.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AAGCTC6AAGCTC6marker_locus79.9 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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