Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACTCAC2ACTCAC2marker_locus114.6 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACTCGT6ACTCGT6marker_locus122.2 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AAGCAT7AAGCAT7marker_locus128.6 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCCTA5ACCCTA5marker_locus135.4 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCACC11ACCACC11marker_locus137 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AAGCGT9AAGCGT9marker_locus138.5 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AACCAC1AACCAC1marker_locus140.2 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACACAG5ACACAG5marker_locus141.9 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06BNL1064BNL1064marker_locus149.8 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACTTGC7ACTTGC7marker_locus157.8 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCCAC3ACCCAC3marker_locus163.9 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AGGCTC5AGGCTC5marker_locus177.6 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACTCGT3ACTCGT3marker_locus196.8 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCCAA9ACCCAA9marker_locus220.2 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AAGCAG3AAGCAG3marker_locus239.9 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01AAGCTC5AAGCTC5marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACACTG7ACACTG7marker_locus16.3 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01A1204A1204marker_locus31.8 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01BNL3888BNL3888marker_locus50.7 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACTCTG3ACTCTG3marker_locus66.8 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACCCTG1ACCCTG1marker_locus75.8 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01A1593A1593marker_locus89.8 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACGTGC8ACGTGC8marker_locus96.7 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACTCTC2ACTCTC2marker_locus100.5 cM
Acala-44 x Pima S-7, F2 (2004).lg11/chr01ACAAGC3ACAAGC3marker_locus108.5 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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