Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg09ACCCTC3ACCCTC3marker_locus46.6 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACTCAC1ACTCAC1marker_locus50.8 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACTCTG6ACTCTG6marker_locus53.6 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACCCTG4ACCCTG4marker_locus58.9 cM
Acala-44 x Pima S-7, F2 (2004).lg09AAGCGT2AAGCGT2marker_locus64.4 cM
Acala-44 x Pima S-7, F2 (2004).lg09AGGCAT6AGGCAT6marker_locus67.4 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACCCAG6ACCCAG6marker_locus68.9 cM
Acala-44 x Pima S-7, F2 (2004).lg09AGCCAA2AGCCAA2marker_locus71.2 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACGACC6ACGACC6marker_locus75.7 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACTACC10ACTACC10marker_locus80.1 cM
Acala-44 x Pima S-7, F2 (2004).lg09AGGCAT2AGGCAT2marker_locus84.1 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACACAG10ACACAG10marker_locus86.7 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACAAGC4ACAAGC4marker_locus89.7 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACAGAC2ACAGAC2marker_locus96.5 cM
Acala-44 x Pima S-7, F2 (2004).lg09AAGCTC8AAGCTC8marker_locus105.2 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACCCAA2ACCCAA2marker_locus113.6 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCACC2ACCACC2marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACACGT6ACACGT6marker_locus45 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACACAG8ACACAG8marker_locus67.5 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06AAGCGT7AAGCGT7marker_locus74 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACTACC12ACTACC12marker_locus79.1 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACACAC6ACACAC6marker_locus93.5 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACCCTG6ACCCTG6marker_locus104 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACGCTA6ACGCTA6marker_locus106.7 cM
Acala-44 x Pima S-7, F2 (2004).lg10/chr06ACACAG4ACACAG4marker_locus106.7 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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