Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg30/chr18ACCCTG3ACCCTG3marker_locus23.1 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18BNL1721BNL1721marker_locus31 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18BNL1079BNL1079marker_locus42.8 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18ACCCAG2ACCCAG2marker_locus68 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18BNL3558BNL3558marker_locus92 cM
Acala-44 x Pima S-7, F2 (2004).lg31ACGGTG5ACGGTG5marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg31ACTACC8ACTACC8marker_locus15.2 cM
Acala-44 x Pima S-7, F2 (2004).lg31BNL3993BNL3993marker_locus26.9 cM
Acala-44 x Pima S-7, F2 (2004).lg31ACACGT1ACACGT1marker_locus31.9 cM
Acala-44 x Pima S-7, F2 (2004).lg31ACCCAA7ACCCAA7marker_locus49.9 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACGTGC1ACGTGC1marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25pAR0364pAR364marker_locus23.6 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25BNL3103BNL3103marker_locus46.4 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACTCGT2ACTCGT2marker_locus65.1 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACGAGC4ACGAGC4marker_locus74.3 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25JESPR0227JESPR227marker_locus90.1 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25JESPR0215JESPR215marker_locus90.8 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25AGGCAA4AGGCAA4marker_locus105.6 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACAGCG3ACAGCG3marker_locus106.2 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACGCTA1ACGCTA1marker_locus113.4 cM
Acala-44 x Pima S-7, F2 (2004).lg32/chr25ACCCAA13ACCCAA13marker_locus140.9 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22AAGGCG3AAGGCG3marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22G1074G1074marker_locus4.5 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACGCTA16ACGCTA16marker_locus27.7 cM
Acala-44 x Pima S-7, F2 (2004).lg33/chr22ACGAGC14ACGAGC14marker_locus33.8 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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