Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg26/chr14AGGCTG7AGGCTG7marker_locus40.1 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14AGGCTG5AGGCTG5marker_locus45.6 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACACAC3ACACAC3marker_locus50.1 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACGGTG1ACGGTG1marker_locus52.4 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACTACC7ACTACC7marker_locus60.5 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACTGCG4ACTGCG4marker_locus69.6 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACCAGC1ACCAGC1marker_locus74.7 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACCCTA3ACCCTA3marker_locus79.9 cM
Acala-44 x Pima S-7, F2 (2004).lg26/chr14ACCAGC4ACCAGC4marker_locus81.6 cM
Acala-44 x Pima S-7, F2 (2004).lg27/chr10ACTTGC6ACTTGC6marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg27/chr10AGGCAG8AGGCAG8marker_locus1.2 cM
Acala-44 x Pima S-7, F2 (2004).lg27/chr10ACGGTG8ACGGTG8marker_locus29.9 cM
Acala-44 x Pima S-7, F2 (2004).lg27/chr10ACACGT14ACACGT14marker_locus48.7 cM
Acala-44 x Pima S-7, F2 (2004).lg27/chr10BNL0256BNL256marker_locus65.1 cM
Acala-44 x Pima S-7, F2 (2004).lg28ACAGCG5ACAGCG5marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg28ACGAGC12ACGAGC12marker_locus10.8 cM
Acala-44 x Pima S-7, F2 (2004).lg28ACGCTA11ACGCTA11marker_locus21.1 cM
Acala-44 x Pima S-7, F2 (2004).lg28AGGCAG11AGGCAG11marker_locus26.9 cM
Acala-44 x Pima S-7, F2 (2004).lg28ACGCGT1ACGCGT1marker_locus28.4 cM
Acala-44 x Pima S-7, F2 (2004).lg28ACGTGC3ACGTGC3marker_locus32.9 cM
Acala-44 x Pima S-7, F2 (2004).lg29AACCAA1AACCAA1marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg29ACACAG7ACACAG7marker_locus21.8 cM
Acala-44 x Pima S-7, F2 (2004).lg29BNL1066BNL1066marker_locus35.6 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18ACACTA5ACACTA5marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg30/chr18JESPR0056JESPR56marker_locus4.8 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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