Acala-44 x Pima S-7, F2 (2004)

Map Overview

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NameAcala-44 x Pima S-7, F2 (2004)
SpeciesGossypium hirsutum x barbadense
Population typeF2
Genome groupAD
Map typegenetic
Map unitcM
Maternal parentAcala 44
Paternal parentPima S-7
Population size94
Number of loci392
Number of QTL7
Number of linkage groups42
Publication[view all]
ContactChen, Jeffrey Z.
Stock
NameTypeDetails
Acala-44 x Pima S-7, F2population
Alias:AP-F2
Description:genetic mapping
Population size:94
Secondary id:cdbpop_000007
Pedigree:Acala 44 / Pima S-7
Contact
NameDetails
Chen, Jeffrey Z.
First name:Jeffrey Z
Last name:Chen
Institution:The University of Texas at Austin
Address:2506 Speedway, NMS 3.122, Austin, Texas 78712
Country:United States
Email:zjchen@mail.utexas.edu
Phone:5124759327
Fax:5124712149
Keywords:Molecular Genetics and Plant Genomics
Last update:15-Apr-2011
Map Loci
This map contains 392 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AAGCTC6AAGCTC6marker_locus79.9 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACGAGC8ACGAGC8marker_locus81.1 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACCCAG8ACCCAG8marker_locus82.5 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12JESPR0270JESPR270marker_locus88.2 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACGCTA5ACGCTA5marker_locus96.5 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AACCTC8AACCTC8marker_locus98.5 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AACCAT1AACCAT1marker_locus99.6 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12AGGCAT1AGGCAT1marker_locus106.2 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACAGCG7ACAGCG7marker_locus110 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACTTGC1ACTTGC1marker_locus110 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACTGCG3ACTGCG3marker_locus110 cM
Acala-44 x Pima S-7, F2 (2004).lg07/chr12ACATGC2ACATGC2marker_locus113.8 cM
Acala-44 x Pima S-7, F2 (2004).lg08AAGCAC3AAGCAC3marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg08ACGCAC1ACGCAC1marker_locus13 cM
Acala-44 x Pima S-7, F2 (2004).lg08AGGCAA1AGGCAA1marker_locus24.6 cM
Acala-44 x Pima S-7, F2 (2004).lg08ACTACC3ACTACC3marker_locus40.3 cM
Acala-44 x Pima S-7, F2 (2004).lg08AACCTC5AACCTC5marker_locus51.4 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACCACC3ACCACC3marker_locus0 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACTCTG9ACTCTG9marker_locus14.1 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACGCTA1ACGCTA1marker_locus17.5 cM
Acala-44 x Pima S-7, F2 (2004).lg09AACCAT3AACCAT3marker_locus20.7 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACGTGC7ACGTGC7marker_locus21.8 cM
Acala-44 x Pima S-7, F2 (2004).lg09AAGCTC1AAGCTC1marker_locus26.1 cM
Acala-44 x Pima S-7, F2 (2004).lg09AGGCAT7AGGCAT7marker_locus34.7 cM
Acala-44 x Pima S-7, F2 (2004).lg09ACTACC9ACTACC9marker_locus44.5 cM
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Map QTL
This map contains 7 QTL:
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Linkage GroupNameTypeStartStopPeak
Acala-44 x Pima S-7, F2 (2004).lg06/chr09qFEL.AP-F2_lg06/ch09QTL59.6 cM72.5 cM-
Acala-44 x Pima S-7, F2 (2004).lg35qFF.AP-F2_lg35QTL10.9 cM16.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg14/chr04qFL.AP-F2_lg14/ch04QTL17.9 cM43.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg05qFS.AP-F2_lg05QTL0 cM40.4 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qFS.AP-F2_lg22/ch09QTL109.2 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSNPP.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
Acala-44 x Pima S-7, F2 (2004).lg22/chr09qSCY.AP-F2_lg22/ch09QTL95.1 cM118.8 cM-
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