TN-RIL-04

Germplasm Overview


Name	TN-RIL-04
Alias	N/A
GRIN ID	N/A
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	recombinant inbred line (RIL) of TM-1 x NM24016
Origin Country	N/A
Origin Detail	New Mexico, USA
Pedigree	TM-1/NM24016 RIL
Maternal Parent	N/A
Paternal Parent	NM24016
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	[view all 252]
SNP Genotype Data	[view all 491]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	PRG-6-124

Alias


Synonym
NM04

Ssr Genotype Data

Total 252 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	TN-RIL (F5:9) SSR genotype	cot036	genetic_marker	190\|198	cot036_190; cot036_198
2	TN-RIL (F5:9) SSR genotype	bnl3431	genetic_marker	230\|230	bnl3431_230; bnl3431_230
3	TN-RIL (F5:9) SSR genotype	bnl2495	genetic_marker	195\|195	bnl2495_195; bnl2495_195
4	TN-RIL (F5:9) SSR genotype	bnl1151	genetic_marker	161\|173	bnl1151_161; bnl1151_173
5	TN-RIL (F5:9) SSR genotype	dpl1575	genetic_marker	114\|114	dpl1575_114; dpl1575_114
6	TN-RIL (F5:9) SSR genotype	bnl2805	genetic_marker	x\|x	bnl2805_x; bnl2805_x
7	TN-RIL (F5:9) SSR genotype	dc40058	genetic_marker	155\|155	dc40058_155; dc40058_155
8	TN-RIL (F5:9) SSR genotype	mucs0535	genetic_marker	272\|272	mucs0535_272; mucs0535_272
9	TN-RIL (F5:9) SSR genotype	bnl4069	genetic_marker	95\|95	bnl4069_95; bnl4069_95
10	TN-RIL (F5:9) SSR genotype	jespr0042	genetic_marker	141\|141	jespr0042_141; jespr0042_141
11	TN-RIL (F5:9) SSR genotype	jespr0006	genetic_marker	211\|211	jespr0006_211; jespr0006_211
12	TN-RIL (F5:9) SSR genotype	dpl0431	genetic_marker	192\|192	dpl0431_192; dpl0431_192
13	TN-RIL (F5:9) SSR genotype	dpl0075	genetic_marker	206\|206	dpl0075_206; dpl0075_206
14	TN-RIL (F5:9) SSR genotype	dpl0003	genetic_marker	187\|187	dpl0003_187; dpl0003_187
15	TN-RIL (F5:9) SSR genotype	dpl0137	genetic_marker	138\|138	dpl0137_138; dpl0137_138
16	TN-RIL (F5:9) SSR genotype	bnl2877	genetic_marker	119\|119	bnl2877_119; bnl2877_119
17	TN-RIL (F5:9) SSR genotype	nau1221	genetic_marker	220\|220	nau1221_220; nau1221_220
18	TN-RIL (F5:9) SSR genotype	shin-0334	genetic_marker	203\|203	shin-0334_203; shin-0334_203
19	TN-RIL (F5:9) SSR genotype	bnl3650	genetic_marker	x\|x	bnl3650_x; bnl3650_x
20	TN-RIL (F5:9) SSR genotype	bnl0827	genetic_marker	255\|263	bnl0827_255; bnl0827_263
21	TN-RIL (F5:9) SSR genotype	bnl3895	genetic_marker	188\|188	bnl3895_188; bnl3895_188
22	TN-RIL (F5:9) SSR genotype	mucs0127	genetic_marker	214\|214	mucs0127_214; mucs0127_214
23	TN-RIL (F5:9) SSR genotype	bnl1227	genetic_marker	175\|175	bnl1227_175; bnl1227_175
24	TN-RIL (F5:9) SSR genotype	mghes0021	genetic_marker	201\|201	mghes0021_201; mghes0021_201
25	TN-RIL (F5:9) SSR genotype	bnl1666	genetic_marker	131\|131	bnl1666_131; bnl1666_131

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Publications


Year	Publication
2012	Gore MA; Percy RG; Zhang JF; Fang DD; Cantrell RG. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population. Journal of Plant Registrations. 2012; 6(1):124-127.

Snp Genotype Data

Total 491 records

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#	Dataset	Marker Name	Allele	Genotype
1	TN-RIL (F:9) SNP genotype	USDA_SNP0001	C/T	T\|T
2	TN-RIL (F:9) SNP genotype	USDA_SNP0002	A/G	-\|-
3	TN-RIL (F:9) SNP genotype	USDA_SNP0003	A/G	A\|G
4	TN-RIL (F:9) SNP genotype	USDA_SNP0004	A/T	A\|T
5	TN-RIL (F:9) SNP genotype	USDA_SNP0005	A/G	G\|G
6	TN-RIL (F:9) SNP genotype	USDA_SNP0006	A/G	-\|-
7	TN-RIL (F:9) SNP genotype	USDA_SNP0007	C/T	-\|-
8	TN-RIL (F:9) SNP genotype	USDA_SNP0008	A/T	T\|T
9	TN-RIL (F:9) SNP genotype	USDA_SNP0009	A/T	-\|-
10	TN-RIL (F:9) SNP genotype	USDA_SNP0010	G/A	-\|-
11	TN-RIL (F:9) SNP genotype	USDA_SNP0011	A/T	A\|A
12	TN-RIL (F:9) SNP genotype	USDA_SNP0012	C/T	C\|C
13	TN-RIL (F:9) SNP genotype	USDA_SNP0013	A/G	A\|A
14	TN-RIL (F:9) SNP genotype	USDA_SNP0014	A/G	-\|-
15	TN-RIL (F:9) SNP genotype	USDA_SNP0015	A/T	T\|T
16	TN-RIL (F:9) SNP genotype	USDA_SNP0016	C/T	C\|C
17	TN-RIL (F:9) SNP genotype	USDA_SNP0017	C/G	G\|G
18	TN-RIL (F:9) SNP genotype	USDA_SNP0018	G/T	-\|-
19	TN-RIL (F:9) SNP genotype	USDA_SNP0019	A/T	-\|-
20	TN-RIL (F:9) SNP genotype	USDA_SNP0020	A/C	A\|A
21	TN-RIL (F:9) SNP genotype	USDA_SNP0021	C/T	T\|T
22	TN-RIL (F:9) SNP genotype	USDA_SNP0022	T/C	C\|C
23	TN-RIL (F:9) SNP genotype	USDA_SNP0023	C/G	-\|-
24	TN-RIL (F:9) SNP genotype	USDA_SNP0024	A/T	T\|T
25	TN-RIL (F:9) SNP genotype	USDA_SNP0025	A/T	-\|-

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