TAM 2562 RKNR

Germplasm Overview


Name	TAM 2562 RKNR
Alias	GP-693 [view all 5]
GRIN ID	PI 607225 PI 603929
Type	Breeding Germplasm
Species	Gossypium hirsutum
In Collection	[view all]
Description	High level of resistance to Root-knot nematode (Meloidogyne incognita). Normal in morphology compared with most upland cotton genotypes, including pubescent leaves and stems, and cream-colored flowers and pollen. Yields competitively with Paymaster HS-26 when grown on the High Plains of Texas. Equal to Paymaster HS-26 in standard fiber quality parameters.
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	M-240RNR/86T(2)-12
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 68]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Alias


Synonym
GP-693
PI 603929
PI 607225
SA 2401
SA-2401

Image


File Name	Legend	Dataset
SA-2401_CS12-2814_IMG_4638_L.jpg	[SA-2401] leaf, College Station Plot# 2813, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_3446_LB.jpg	[SA-2401] leaf close up of the back surface, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7056_B.jpg	[SA-2401] green boll, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7057_BO.jpg	[SA-2401] boll open, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7058_BN.jpg	[SA-2401] boll showing nectaries, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 68 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T14	petal color	cream	MX_CLM_TCM_2014	200
2	NCGC germplasm evaluation, T14	petal spot	none	MX_CLM_TCM_2014	200
3	NCGC germplasm evaluation, T14	photoperiod	open bolls	MX_CLM_TCM_2014	200
4	NCGC germplasm evaluation, T14	plant shape	normal	MX_CLM_TCM_2014	200
5	NCGC germplasm evaluation, T14	plot maturity	less than half open	MX_CLM_TCM_2014	200
6	NCGC germplasm evaluation, T14	pollen color	cream	MX_CLM_TCM_2014	200
7	NCGC germplasm evaluation, T14	population homogeneity	uniform	MX_CLM_TCM_2014	200
8	NCGC germplasm evaluation, T14	seed fuzz grade	high	MX_CLM_TCM_2014	200
9	NCGC germplasm evaluation, T14	seed type	free	MX_CLM_TCM_2014	200
10	NCGC germplasm evaluation, T14	stem color	sun red	MX_CLM_TCM_2014	200
11	NCGC germplasm evaluation, T14	stem gossypol glands	medium	MX_CLM_TCM_2014	200
12	NCGC germplasm evaluation, T14	stigma exsertion	normal	MX_CLM_TCM_2014	200
13	NCGC germplasm evaluation, T14	trichome density on leaf	moderate	MX_CLM_TCM_2014	200
14	NCGC germplasm evaluation, T14	trichome density on stem	moderate	MX_CLM_TCM_2014	200
15	NCGC germplasm evaluation, T14	plant height (m)	0.76	MX_CLM_TCM_2014	200
16	NCGC germplasm evaluation, T14	leaf nectaries	one, main vein	MX_CLM_TCM_2014	200
17	NCGC germplasm evaluation, T14	plot plant stand	0.75	MX_CLM_TCM_2014	200
18	NCGC germplasm evaluation, T14	productiveness	13-24 per plant	MX_CLM_TCM_2014	200

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
2	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
3	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	191\|191	dpl0618_191; dpl0618_191
4	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
5	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|123	nau2277_123; nau2277_123
6	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198	bnl3985_169; bnl3985_198
7	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	165\|175\|179	cir0218_165; cir0218_175; cir0218_179
8	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	167\|167	jespr0291_167; jespr0291_167
9	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	169\|183	tmb1648_169; tmb1648_183
10	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
11	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	245\|251	dpl0405_245; dpl0405_251
12	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	150\|165	jespr0065_150; jespr0065_165
13	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171	gh537_168; gh537_171
14	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	136\|136	cir0169_136; cir0169_136
15	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	223\|223	cir0081_223; cir0081_223
16	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	216\|262	tmb2295_216; tmb2295_262
17	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	114\|118\|138\|187	bnl3545_114; bnl3545_118; bnl3545_138; bnl3545_187
18	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|225	mghes0076_192; mghes0076_225
19	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|209\|219	cir0165_207; cir0165_209; cir0165_219
20	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	234\|238	dpl0039_234; dpl0039_238
21	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	80\|80	gh495_80; gh495_80
22	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	208\|208	mghes0029_208; mghes0029_208
23	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	232\|232	tmb2018_232; tmb2018_232
24	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|161	jespr0220_127; jespr0220_161
25	NCGC_SNTD_SSR_genotype_2015	bnl4017	genetic_marker	221\|225	bnl4017_221; bnl4017_225

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Publications


Year	Publication
1998	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0258	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0271	A/G	A
3	TAMU_SNP63K_genotype	USDA_SNP0278	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0286	A/G	G
5	TAMU_SNP63K_genotype	USDA_SNP0290	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0291	A/C	C
7	TAMU_SNP63K_genotype	USDA_SNP0298	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0304	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0306	C/T	-
10	TAMU_SNP63K_genotype	USDA_SNP0314	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0323	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0324	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0332	C/T	T
14	TAMU_SNP63K_genotype	USDA_SNP0337	C/T	C
15	TAMU_SNP63K_genotype	USDA_SNP0338	C/T	-
16	TAMU_SNP63K_genotype	USDA_SNP0357	A/G	A
17	TAMU_SNP63K_genotype	USDA_SNP0361	C/T	T
18	TAMU_SNP63K_genotype	USDA_SNP0363	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0365	C/T	-
20	TAMU_SNP63K_genotype	USDA_SNP0368	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0370	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0377	A/G	G
23	TAMU_SNP63K_genotype	USDA_SNP0379	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0382	A/G	A
25	TAMU_SNP63K_genotype	USDA_SNP0385	A/C	C

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Cross References

External references for this accession


Database	Accession
GRIN_Regist	GP-693
GRIN	PI 603929
GRIN	PI 607225

In Collection

Name	ID used in Collection	External Database
NPGS Crop Science Registration (USA)	GP-693
GRIN NPGS Cotton Collection (USA)	PI 607225; PI 603929	GRIN: ; GRIN:

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