TAM 2562 RKNR

Germplasm Overview


Name	TAM 2562 RKNR
Alias	GP-693 [view all 5]
GRIN ID	PI 607225 PI 603929
Type	Breeding Germplasm
Species	Gossypium hirsutum
In Collection	[view all]
Description	High level of resistance to Root-knot nematode (Meloidogyne incognita). Normal in morphology compared with most upland cotton genotypes, including pubescent leaves and stems, and cream-colored flowers and pollen. Yields competitively with Paymaster HS-26 when grown on the High Plains of Texas. Equal to Paymaster HS-26 in standard fiber quality parameters.
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	M-240RNR/86T(2)-12
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 68]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Alias


Synonym
GP-693
PI 603929
PI 607225
SA 2401
SA-2401

Image


File Name	Legend	Dataset
SA-2401_CS12-2814_IMG_4638_L.jpg	[SA-2401] leaf, College Station Plot# 2813, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_3446_LB.jpg	[SA-2401] leaf close up of the back surface, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7056_B.jpg	[SA-2401] green boll, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7057_BO.jpg	[SA-2401] boll open, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7058_BN.jpg	[SA-2401] boll showing nectaries, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 68 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T14	petal color	cream	MX_CLM_TCM_2014	200
2	NCGC germplasm evaluation, T14	petal spot	none	MX_CLM_TCM_2014	200
3	NCGC germplasm evaluation, T14	photoperiod	open bolls	MX_CLM_TCM_2014	200
4	NCGC germplasm evaluation, T14	plant shape	normal	MX_CLM_TCM_2014	200
5	NCGC germplasm evaluation, T14	plot maturity	less than half open	MX_CLM_TCM_2014	200
6	NCGC germplasm evaluation, T14	pollen color	cream	MX_CLM_TCM_2014	200
7	NCGC germplasm evaluation, T14	population homogeneity	uniform	MX_CLM_TCM_2014	200
8	NCGC germplasm evaluation, T14	seed fuzz grade	high	MX_CLM_TCM_2014	200
9	NCGC germplasm evaluation, T14	seed type	free	MX_CLM_TCM_2014	200
10	NCGC germplasm evaluation, T14	stem color	sun red	MX_CLM_TCM_2014	200
11	NCGC germplasm evaluation, T14	stem gossypol glands	medium	MX_CLM_TCM_2014	200
12	NCGC germplasm evaluation, T14	stigma exsertion	normal	MX_CLM_TCM_2014	200
13	NCGC germplasm evaluation, T14	trichome density on leaf	moderate	MX_CLM_TCM_2014	200
14	NCGC germplasm evaluation, T14	trichome density on stem	moderate	MX_CLM_TCM_2014	200
15	NCGC germplasm evaluation, T14	plant height (m)	0.76	MX_CLM_TCM_2014	200
16	NCGC germplasm evaluation, T14	leaf nectaries	one, main vein	MX_CLM_TCM_2014	200
17	NCGC germplasm evaluation, T14	plot plant stand	0.75	MX_CLM_TCM_2014	200
18	NCGC germplasm evaluation, T14	productiveness	13-24 per plant	MX_CLM_TCM_2014	200

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	154\|154	bnl2443_154; bnl2443_154
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	113\|154	bnl1495_113; bnl1495_154
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	191\|195	bnl2495_191; bnl2495_195
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	105\|105	gh283_105; gh283_105
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	152\|152	bnl3992_152; bnl3992_152
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|134\|136	bnl1531_116; bnl1531_121; bnl1531_134; bnl1531_136
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|194	bnl3644_185; bnl3644_194
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|194	bnl3371_168; bnl3371_194
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	127\|127	nau2140_127; nau2140_127
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|176	dpl0135_156; dpl0135_176
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|207	bnl0256_182; bnl0256_207
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	173\|178	tmb0043_173; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	149\|153\|185	bnl2960_149; bnl2960_153; bnl2960_185
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	199\|203	tmb0836_199; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	210\|210	bnl3441_210; bnl3441_210
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	211\|211	bnl3580_211; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	196\|196	bnl1231_196; bnl1231_196
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|238	bnl3594_182; bnl3594_238
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	180\|180	tmb1421_180; tmb1421_180
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	203\|203	bnl4061_203; bnl4061_203
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	337\|354	bnl3650_337; bnl3650_354
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|189	bnl3474_180; bnl3474_189
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Publications


Year	Publication
1998	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	A
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	A
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	G
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	T

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Last

Cross References

External references for this accession


Database	Accession
GRIN_Regist	GP-693
GRIN	PI 603929
GRIN	PI 607225

In Collection

Name	ID used in Collection	External Database
NPGS Crop Science Registration (USA)	GP-693
GRIN NPGS Cotton Collection (USA)	PI 607225; PI 603929	GRIN: ; GRIN:

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