TAM 2562 RKNR

Germplasm Overview


Name	TAM 2562 RKNR
Alias	GP-693 [view all 5]
GRIN ID	PI 607225 PI 603929
Type	Breeding Germplasm
Species	Gossypium hirsutum
In Collection	[view all]
Description	High level of resistance to Root-knot nematode (Meloidogyne incognita). Normal in morphology compared with most upland cotton genotypes, including pubescent leaves and stems, and cream-colored flowers and pollen. Yields competitively with Paymaster HS-26 when grown on the High Plains of Texas. Equal to Paymaster HS-26 in standard fiber quality parameters.
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	M-240RNR/86T(2)-12
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 68]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Alias


Synonym
GP-693
PI 603929
PI 607225
SA 2401
SA-2401

Image


File Name	Legend	Dataset
SA-2401_CS12-2814_IMG_4638_L.jpg	[SA-2401] leaf, College Station Plot# 2813, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_3446_LB.jpg	[SA-2401] leaf close up of the back surface, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7056_B.jpg	[SA-2401] green boll, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7057_BO.jpg	[SA-2401] boll open, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)
SA-2401_CS12-2814_MG_7058_BN.jpg	[SA-2401] boll showing nectaries, College Station Plot# 2814, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 68 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, CS12	trichome density on leaf	moderate	US_TX_CS_2012	2814
2	NCGC germplasm evaluation, CS12	trichome density on stem	moderate	US_TX_CS_2012	2814
3	NCGC germplasm evaluation, CS12	plant height (m)	0.76	US_TX_CS_2012	2814
4	NCGC germplasm evaluation, CS12	leaf nectaries	one, main vein	US_TX_CS_2012	2814
5	NCGC germplasm evaluation, CS12	plot plant stand	1 plant	US_TX_CS_2012	2814
6	NCGC germplasm evaluation, CS12	productiveness	13-24 per plant	US_TX_CS_2012	2814
7	NCGC germplasm evaluation, T14	boll color	green	MX_CLM_TCM_2014	200
8	NCGC germplasm evaluation, T14	boll gossypol glands	medium	MX_CLM_TCM_2014	200
9	NCGC germplasm evaluation, T14	boll nectaries	reduced	MX_CLM_TCM_2014	200
10	NCGC germplasm evaluation, T14	boll pitting	smooth	MX_CLM_TCM_2014	200
11	NCGC germplasm evaluation, T14	boll point	pointed	MX_CLM_TCM_2014	200
12	NCGC germplasm evaluation, T14	boll shape	oval	MX_CLM_TCM_2014	200
13	NCGC germplasm evaluation, T14	boll size	medium	MX_CLM_TCM_2014	200
14	NCGC germplasm evaluation, T14	bract color	sun red	MX_CLM_TCM_2014	200
15	NCGC germplasm evaluation, T14	bract nectaries	present	MX_CLM_TCM_2014	200
16	NCGC germplasm evaluation, T14	bract teeth number	medium	MX_CLM_TCM_2014	200
17	NCGC germplasm evaluation, T14	bract teeth size	large	MX_CLM_TCM_2014	200
18	NCGC germplasm evaluation, T14	bract type	normal	MX_CLM_TCM_2014	200
19	NCGC germplasm evaluation, T14	canopy type	typical	MX_CLM_TCM_2014	200
20	NCGC germplasm evaluation, T14	fruiting type	normal	MX_CLM_TCM_2014	200
21	NCGC germplasm evaluation, T14	leaf color	green	MX_CLM_TCM_2014	200
22	NCGC germplasm evaluation, T14	leaf gossypol glands	medium	MX_CLM_TCM_2014	200
23	NCGC germplasm evaluation, T14	leaf shape	normal	MX_CLM_TCM_2014	200
24	NCGC germplasm evaluation, T14	leaf size	medium	MX_CLM_TCM_2014	200
25	NCGC germplasm evaluation, T14	lint color	white	MX_CLM_TCM_2014	200

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0071	genetic_marker	158\|176	dpl0071_158; dpl0071_176
2	NCGC_SNTD_SSR_genotype_2015	bnl1673	genetic_marker	169\|197	bnl1673_169; bnl1673_197
3	NCGC_SNTD_SSR_genotype_2015	bnl3090	genetic_marker	212\|239	bnl3090_212; bnl3090_239
4	NCGC_SNTD_SSR_genotype_2015	cir0320	genetic_marker	235\|235	cir0320_235; cir0320_235
5	NCGC_SNTD_SSR_genotype_2015	dpl0249	genetic_marker	119\|125	dpl0249_119; dpl0249_125
6	NCGC_SNTD_SSR_genotype_2015	mghes0022	genetic_marker	192\|195	mghes0022_192; mghes0022_195
7	NCGC_SNTD_SSR_genotype_2015	bnl4028	genetic_marker	183\|183	bnl4028_183; bnl4028_183
8	NCGC_SNTD_SSR_genotype_2015	bnl1897	genetic_marker	141\|141	bnl1897_141; bnl1897_141
9	NCGC_SNTD_SSR_genotype_2015	dpl0570	genetic_marker	126\|140	dpl0570_126; dpl0570_140
10	NCGC_SNTD_SSR_genotype_2015	tmb1427	genetic_marker	160\|191	tmb1427_160; tmb1427_191
11	NCGC_SNTD_SSR_genotype_2015	cir0105	genetic_marker	96\|96	cir0105_96; cir0105_96
12	NCGC_SNTD_SSR_genotype_2015	cir0253	genetic_marker	154\|174	cir0253_154; cir0253_174
13	NCGC_SNTD_SSR_genotype_2015	tmb2068	genetic_marker	149\|149	tmb2068_149; tmb2068_149
14	NCGC_SNTD_SSR_genotype_2015	bnl2570	genetic_marker	233\|235	bnl2570_233; bnl2570_235
15	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
16	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246	cir0347_236; cir0347_246
17	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	222\|227	cir0009_222; cir0009_227
18	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	138\|142	bnl0530_138; bnl0530_142
19	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
20	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
21	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	98\|98	bnl0409_98; bnl0409_98
22	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	137\|166	dpl0196_137; dpl0196_166
23	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	166\|166	bnl1521_166; bnl1521_166
24	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|226	tmb1640_196; tmb1640_200; tmb1640_226
25	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|240	dpl0541_206; dpl0541_240

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Publications


Year	Publication
1998	Starr JL, Smith CW. Registration of Three Root‐Knot Nematode Resistant Germplasm Lines of Upland Cotton. Crop Science. 1999 Nov 1, 39(1):303-303.

Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Cross References

External references for this accession


Database	Accession
GRIN_Regist	GP-693
GRIN	PI 603929
GRIN	PI 607225

In Collection

Name	ID used in Collection	External Database
NPGS Crop Science Registration (USA)	GP-693
GRIN NPGS Cotton Collection (USA)	PI 607225; PI 603929	GRIN: ; GRIN:

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