TX-1229

Germplasm Overview


Name	TX-1229
Alias	PI 529994 [view all 2]
GRIN ID	PI 529994
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Jamaica
Origin Detail	Jamaica
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 26]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: LUKEFAHR COLL
Reference	N/A

Alias


Synonym
PI 529994
TEX 1229

Image


File Name	Legend	Dataset
TX-1229_T12-432_MG_0228_L.jpg	[TX-1229] leaf, Tecoman Plot# 430, 2012	NCGC digital imaging (Tecoman, 2012)
TX-1229_T12-432_MG_9855_LB.jpg	[TX-1229] leaf close up of the back surface, Tecoman Plot# 432, 2012	NCGC digital imaging (Tecoman, 2012)

Phenotypic Data

Total 26 trait scores

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#	Dataset	Descriptor	Value	Environment	Replication	Plot
1	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012		432

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	193\|193	dpl0618_193; dpl0618_193
2	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
3	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|123	nau2277_123; nau2277_123
4	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198	bnl3985_169; bnl3985_198
5	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	165\|179\|188	cir0218_165; cir0218_179; cir0218_188
6	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	167\|167	jespr0291_167; jespr0291_167
7	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	169\|189	tmb1648_169; tmb1648_189
8	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
9	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	242\|242	dpl0405_242; dpl0405_242
10	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	131\|131	jespr0065_131; jespr0065_131
11	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171	gh537_168; gh537_171
12	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	134\|134	cir0169_134; cir0169_134
13	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	225\|225	cir0081_225; cir0081_225
14	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	206\|216\|221	tmb2295_206; tmb2295_216; tmb2295_221
15	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	114\|128\|190	bnl3545_114; bnl3545_128; bnl3545_190
16	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|207	mghes0076_192; mghes0076_207
17	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|217	cir0165_207; cir0165_217
18	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	238\|243	dpl0039_238; dpl0039_243
19	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	74\|74	gh495_74; gh495_74
20	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	214\|214	mghes0029_214; mghes0029_214
21	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	236\|236	tmb2018_236; tmb2018_236
22	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|163	jespr0220_127; jespr0220_163
23	NCGC_SNTD_SSR_genotype_2015	bnl4017	genetic_marker	221\|233	bnl4017_221; bnl4017_233
24	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	142\|142	bnl2443_142; bnl2443_142
25	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	113\|117	bnl1495_113; bnl1495_117

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0143	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0149	C/T	T
3	TAMU_SNP63K_genotype	USDA_SNP0160	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0162	C/T	T
5	TAMU_SNP63K_genotype	USDA_SNP0172	G/A	A
6	TAMU_SNP63K_genotype	USDA_SNP0186	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0188	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0194	A/G	G
9	TAMU_SNP63K_genotype	USDA_SNP0197	C/T	T
10	TAMU_SNP63K_genotype	USDA_SNP0202	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0203	C/T	Y
12	TAMU_SNP63K_genotype	USDA_SNP0209	C/T	T
13	TAMU_SNP63K_genotype	USDA_SNP0220	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0223	A/G	A
15	TAMU_SNP63K_genotype	USDA_SNP0224	C/T	T
16	TAMU_SNP63K_genotype	USDA_SNP0226	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0230	C/T	C
18	TAMU_SNP63K_genotype	USDA_SNP0236	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0237	A/G	G
20	TAMU_SNP63K_genotype	USDA_SNP0238	G/T	T
21	TAMU_SNP63K_genotype	USDA_SNP0240	C/T	T
22	TAMU_SNP63K_genotype	USDA_SNP0241	A/G	A
23	TAMU_SNP63K_genotype	USDA_SNP0250	G/T	G
24	TAMU_SNP63K_genotype	USDA_SNP0251	A/G	G
25	TAMU_SNP63K_genotype	USDA_SNP0257	A/G	A

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1229
GRIN	PI 529994

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 529994	GRIN:
NCGC Cotton Race Collection (USA)	TX-1229

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