TX-1229

Germplasm Overview


Name	TX-1229
Alias	PI 529994 [view all 2]
GRIN ID	PI 529994
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Jamaica
Origin Detail	Jamaica
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 26]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: LUKEFAHR COLL
Reference	N/A

Alias


Synonym
PI 529994
TEX 1229

Image


File Name	Legend	Dataset
TX-1229_T12-432_MG_0228_L.jpg	[TX-1229] leaf, Tecoman Plot# 430, 2012	NCGC digital imaging (Tecoman, 2012)
TX-1229_T12-432_MG_9855_LB.jpg	[TX-1229] leaf close up of the back surface, Tecoman Plot# 432, 2012	NCGC digital imaging (Tecoman, 2012)

Phenotypic Data

Total 26 trait scores

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#	Dataset	Descriptor	Value	Environment	Replication	Plot
1	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012		432

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0717	genetic_marker	230\|241	dpl0717_230; dpl0717_241
2	NCGC_SNTD_SSR_genotype_2015	dpl0094	genetic_marker	197\|228	dpl0094_197; dpl0094_228
3	NCGC_SNTD_SSR_genotype_2015	dpl0520	genetic_marker	179\|195	dpl0520_179; dpl0520_195
4	NCGC_SNTD_SSR_genotype_2015	stv0023	genetic_marker	139\|140	stv0023_139; stv0023_140
5	NCGC_SNTD_SSR_genotype_2015	bnl2496	genetic_marker	141\|148	bnl2496_141; bnl2496_148
6	NCGC_SNTD_SSR_genotype_2015	bnl0569	genetic_marker	137\|147	bnl0569_137; bnl0569_147
7	NCGC_SNTD_SSR_genotype_2015	cir0307	genetic_marker	181\|181	cir0307_181; cir0307_181
8	NCGC_SNTD_SSR_genotype_2015	bnl1417	genetic_marker	101\|101	bnl1417_101; bnl1417_101
9	NCGC_SNTD_SSR_genotype_2015	cir0203	genetic_marker	255\|255	cir0203_255; cir0203_255
10	NCGC_SNTD_SSR_genotype_2015	dpl0600	genetic_marker	168\|168	dpl0600_168; dpl0600_168
11	NCGC_SNTD_SSR_genotype_2015	tmb0514	genetic_marker	193\|197	tmb0514_193; tmb0514_197
12	NCGC_SNTD_SSR_genotype_2015	bnl4030	genetic_marker	112\|114	bnl4030_112; bnl4030_114
13	NCGC_SNTD_SSR_genotype_2015	bnl4071	genetic_marker	213\|237	bnl4071_213; bnl4071_237
14	NCGC_SNTD_SSR_genotype_2015	jespr0008	genetic_marker	285\|285	jespr0008_285; jespr0008_285
15	NCGC_SNTD_SSR_genotype_2015	tmb0382	genetic_marker	191\|191	tmb0382_191; tmb0382_191
16	NCGC_SNTD_SSR_genotype_2015	bnl0387	genetic_marker	204\|214	bnl0387_204; bnl0387_214
17	NCGC_SNTD_SSR_genotype_2015	jespr0300	genetic_marker	198\|207	jespr0300_198; jespr0300_207
18	NCGC_SNTD_SSR_genotype_2015	tmb1295	genetic_marker	189\|197\|229	tmb1295_189; tmb1295_197; tmb1295_229
19	NCGC_SNTD_SSR_genotype_2015	tmb0799	genetic_marker	150\|166	tmb0799_150; tmb0799_166
20	NCGC_SNTD_SSR_genotype_2015	jespr0153	genetic_marker	96\|116	jespr0153_96; jespr0153_116
21	NCGC_SNTD_SSR_genotype_2015	gh048	genetic_marker	81\|81	gh048_81; gh048_81
22	NCGC_SNTD_SSR_genotype_2015	bnl1551	genetic_marker	165\|165	bnl1551_165; bnl1551_165
23	NCGC_SNTD_SSR_genotype_2015	bnl2572	genetic_marker	241\|241	bnl2572_241; bnl2572_241
24	NCGC_SNTD_SSR_genotype_2015	cir0286	genetic_marker	124\|132	cir0286_124; cir0286_132
25	NCGC_SNTD_SSR_genotype_2015	jespr0274	genetic_marker	107\|115	jespr0274_107; jespr0274_115

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	-
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	C
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	C
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	T

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1229
GRIN	PI 529994

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 529994	GRIN:
NCGC Cotton Race Collection (USA)	TX-1229

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