Handan-208 x Pima-90, F2:3 (2007)

Map Overview


Name	Handan-208 x Pima-90, F2:3 (2007)
Species	Gossypium hirsutum x barbadense
Software	MapMaker v3.0b
Population type	F2:3
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1028
Number of QTL	43
Number of linkage groups	26
Publication	[view all]
Contact	Zhang, Xian-Long

Contact

Name

Details

Zhang, Xian-Long

Description:	Genomics breeding
First name:	Xian-Long
Last name:	Zhang
Title:	Professor
Institution:	College of Plant Science and Technology, Huazhong Agricultural University
Address:	#1 Shizishan, Wuhan, Hubei 430070
Country:	China
Email:	xlzhang@mail.hzau.edu.cn
Phone:	+86 27 87280510
Fax:	+86 27 87280016
Last update:	12-Jun-2009

Publication


Year	Publications
2005	Lin Z, He D, Zhang X, Nie Y, Guo X, Feng C, Stewart J. Linkage map construction and mapping QTL for cotton fibre quality using SRAP, SSR and RAPD. Plant breeding. 2005; 124(2):180-187
2005	He D, Lin Z, Zhang X, Nie Y, Guo X, Feng C, Stewart J. Mapping QTLs of traits contributing to yield and analysis of genetic effects in tetraploid cotton. Euphytica : international journal of plant breeding. 2005; 144(1-2):141-149
2007	He D, Lin Z, Zhang X, Nie Y, Guo X, Zhang Y, Li W. QTL mapping for economic traits based on a dense genetic map of cotton with PCR-based markers using the interspecific cross of Gossypium hirsutum x Gossypium barbadense. Euphytica. 2007; 153(1-2):181-197

Map Loci

This map contains 1,028 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Handan-208 x Pima-90, F2:3 (2007).chr23	m8e13-300	m8e13-300	marker_locus	79.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	S1297	S1297	marker_locus	79.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m13e9-200	m13e9-200	marker_locus	79.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	JESPR0151	JESPR151	marker_locus	79.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m1e5-250	m1e5-250	marker_locus	80.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m4e2-680	m4e2-680	marker_locus	83.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m4e4-530	m4e4-530	marker_locus	85.3 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	CIR0060	CIR060	marker_locus	88.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	BNL2690	BNL2690	marker_locus	92.1 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	MGHES0011	MGHES11b	marker_locus	95.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m10e2-560	m10e2-560	marker_locus	99.3 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m8e17-700	m8e17-700	marker_locus	99.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m11e11-780	m11e11-780	marker_locus	101.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	JESPR0135	JESPR135	marker_locus	111.1 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	TMB0598	TMHN07	marker_locus	116.4 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	CIR0413	CIR413a	marker_locus	128.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	MGHES0022	MGHES22	marker_locus	135 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	BNL3140	BNL3140	marker_locus	138.1 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	CIR0401	CIR401	marker_locus	141.5 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m2e6-250	m2e6-250	marker_locus	147.1 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m13e9-400	m13e9-400	marker_locus	149.2 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	BNL3530	BNL3530	marker_locus	150.6 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m5e8-700	m5e8-700	marker_locus	152.8 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	m3e3-600	m3e3-600	marker_locus	155.3 cM
Handan-208 x Pima-90, F2:3 (2007).chr23	BNL2741	BNL2741	marker_locus	160.3 cM

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Map QTL

This map contains 43 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Handan-208 x Pima-90, F2:3 (2007).chr14	qLY.HP-ch14	QTL	116.9 cM	120.4 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.1	QTL	99.2 cM	101.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.2	QTL	101.7 cM	106.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr14	qMIC.HP-ch14.3	QTL	106.7 cM	109 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr15	qLY.HP-ch15	QTL	21.6 cM	28.2 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr17	qLI.HP-ch17	QTL	216.6 cM	220.9 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr19/lgD08	qLI.HP-ch19	QTL	133.8 cM	135.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr21/lgD02	qSCY.HP-ch21	QTL	167.5 cM	179.1 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr22	qMIC.HP-ch22	QTL	0 cM	18.3 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qFS.HP-ch23	QTL	99.5 cM	101.8 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qLI.HP-ch23	QTL	32.4 cM	207 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qLY.HP-ch23	QTL	71.3 cM	74.5 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr23	qSI.HP-ch23	QTL	32.4 cM	207 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr24/lgD03	qMIC.HP-ch24	QTL	80.9 cM	89.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr25	qLY.HP-ch25	QTL	173.2 cM	175.7 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr25	qSI.HP-ch25	QTL	261.3 cM	264.6 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr26	qLY.HP-ch26	QTL	71.7 cM	74.2 cM	-
Handan-208 x Pima-90, F2:3 (2007).chr26	qSI.HP-ch26	QTL	71.7 cM	74.2 cM	-

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Handan-208 x Pima-90, F2:3 (2007)