TN-RIL-02

Germplasm Overview


Name	TN-RIL-02
Alias	N/A
GRIN ID	N/A
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	recombinant inbred line (RIL) of TM-1 x NM24016
Origin Country	N/A
Origin Detail	New Mexico, USA
Pedigree	TM-1/NM24016 RIL
Maternal Parent	N/A
Paternal Parent	NM24016
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	[view all 252]
SNP Genotype Data	[view all 491]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	PRG-6-124

Alias


Synonym
NM02

Ssr Genotype Data

Total 252 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	TN-RIL (F5:9) SSR genotype	mghes0040	genetic_marker	222\|222	mghes0040_222; mghes0040_222
2	TN-RIL (F5:9) SSR genotype	cir0238	genetic_marker	333\|333	cir0238_333; cir0238_333
3	TN-RIL (F5:9) SSR genotype	bnl3359	genetic_marker	222\|222	bnl3359_222; bnl3359_222
4	TN-RIL (F5:9) SSR genotype	shin-0289	genetic_marker	162\|162	shin-0289_162; shin-0289_162
5	TN-RIL (F5:9) SSR genotype	cir0096	genetic_marker	323\|323	cir0096_323; cir0096_323
6	TN-RIL (F5:9) SSR genotype	dc30026	genetic_marker	168\|168	dc30026_168; dc30026_168
7	TN-RIL (F5:9) SSR genotype	dpl0200	genetic_marker	228\|233	dpl0200_228; dpl0200_233
8	TN-RIL (F5:9) SSR genotype	dpl0163	genetic_marker	185\|185	dpl0163_185; dpl0163_185
9	TN-RIL (F5:9) SSR genotype	shin-0963	genetic_marker	138\|138	shin-0963_138; shin-0963_138
10	TN-RIL (F5:9) SSR genotype	dpl0481	genetic_marker	227\|227	dpl0481_227; dpl0481_227
11	TN-RIL (F5:9) SSR genotype	dpl0145	genetic_marker	208\|208	dpl0145_208; dpl0145_208
12	TN-RIL (F5:9) SSR genotype	bnl3948	genetic_marker	97\|97	bnl3948_97; bnl3948_97
13	TN-RIL (F5:9) SSR genotype	shin-0409	genetic_marker	178\|178	shin-0409_178; shin-0409_178
14	TN-RIL (F5:9) SSR genotype	bnl4061	genetic_marker	202\|202	bnl4061_202; bnl4061_202
15	TN-RIL (F5:9) SSR genotype	bnl3474	genetic_marker	172\|172	bnl3474_172; bnl3474_172
16	TN-RIL (F5:9) SSR genotype	bnl3241	genetic_marker	120\|120	bnl3241_120; bnl3241_120
17	TN-RIL (F5:9) SSR genotype	dpl0908	genetic_marker	187\|187	dpl0908_187; dpl0908_187
18	TN-RIL (F5:9) SSR genotype	dpl0318	genetic_marker	220\|220	dpl0318_220; dpl0318_220
19	TN-RIL (F5:9) SSR genotype	dpl1373	genetic_marker	288\|288	dpl1373_288; dpl1373_288
20	TN-RIL (F5:9) SSR genotype	bnl3792	genetic_marker	231\|231	bnl3792_231; bnl3792_231
21	TN-RIL (F5:9) SSR genotype	nau2265	genetic_marker	233\|233	nau2265_233; nau2265_233
22	TN-RIL (F5:9) SSR genotype	musb0285	genetic_marker	221\|221	musb0285_221; musb0285_221
23	TN-RIL (F5:9) SSR genotype	cm0003	genetic_marker	122\|122	cm0003_122; cm0003_122
24	TN-RIL (F5:9) SSR genotype	bnl1047	genetic_marker	150\|150	bnl1047_150; bnl1047_150
25	TN-RIL (F5:9) SSR genotype	bnl1421	genetic_marker	228\|228	bnl1421_228; bnl1421_228

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Publications


Year	Publication
2012	Gore MA; Percy RG; Zhang JF; Fang DD; Cantrell RG. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population. Journal of Plant Registrations. 2012; 6(1):124-127.

Snp Genotype Data

Total 491 records

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#	Dataset	Marker Name	Allele	Genotype
1	TN-RIL (F:9) SNP genotype	USDA_SNP0001	C/T	T\|T
2	TN-RIL (F:9) SNP genotype	USDA_SNP0002	A/G	G\|G
3	TN-RIL (F:9) SNP genotype	USDA_SNP0003	A/G	A\|A
4	TN-RIL (F:9) SNP genotype	USDA_SNP0004	A/T	A\|A
5	TN-RIL (F:9) SNP genotype	USDA_SNP0005	A/G	G\|G
6	TN-RIL (F:9) SNP genotype	USDA_SNP0006	A/G	-\|-
7	TN-RIL (F:9) SNP genotype	USDA_SNP0007	C/T	T\|T
8	TN-RIL (F:9) SNP genotype	USDA_SNP0008	A/T	T\|T
9	TN-RIL (F:9) SNP genotype	USDA_SNP0009	A/T	-\|-
10	TN-RIL (F:9) SNP genotype	USDA_SNP0010	G/A	-\|-
11	TN-RIL (F:9) SNP genotype	USDA_SNP0011	A/T	A\|A
12	TN-RIL (F:9) SNP genotype	USDA_SNP0012	C/T	-\|-
13	TN-RIL (F:9) SNP genotype	USDA_SNP0013	A/G	-\|-
14	TN-RIL (F:9) SNP genotype	USDA_SNP0014	A/G	-\|-
15	TN-RIL (F:9) SNP genotype	USDA_SNP0015	A/T	A\|A
16	TN-RIL (F:9) SNP genotype	USDA_SNP0016	C/T	T\|T
17	TN-RIL (F:9) SNP genotype	USDA_SNP0017	C/G	C\|C
18	TN-RIL (F:9) SNP genotype	USDA_SNP0018	G/T	-\|-
19	TN-RIL (F:9) SNP genotype	USDA_SNP0019	A/T	-\|-
20	TN-RIL (F:9) SNP genotype	USDA_SNP0020	A/C	A\|A
21	TN-RIL (F:9) SNP genotype	USDA_SNP0021	C/T	T\|T
22	TN-RIL (F:9) SNP genotype	USDA_SNP0022	T/C	C\|C
23	TN-RIL (F:9) SNP genotype	USDA_SNP0023	C/G	-\|-
24	TN-RIL (F:9) SNP genotype	USDA_SNP0024	A/T	T\|T
25	TN-RIL (F:9) SNP genotype	USDA_SNP0025	A/T	-\|-

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