MCU-5 x Siokra 1-4, RIL (2015 SNP)

Map Overview


Name	MCU-5 x Siokra 1-4, RIL (2015 SNP)
Species	Gossypium hirsutum
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1244
Number of QTL	4
Number of linkage groups	53
Publication	[view all]
Contact	N/A

Publication


Year	Publications
2014	Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.

Map Loci

This map contains 1,244 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_6138905	Chr04_6138905	marker_locus	203.14 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_6771779	Chr04_6771778	marker_locus	206.28 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_6481113	Chr04_6481112	marker_locus	207.37 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_39660905	Chr04_39660904	marker_locus	215.87 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_38945901	Chr04_38945901	marker_locus	216.73 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_38464093	Chr04_38464093	marker_locus	217.16 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_32898051	Chr04_32898050	marker_locus	217.58 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_39256526	Chr04_39256526	marker_locus	218.65 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_39430528	Chr04_39430528	marker_locus	219.09 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_34311294	Chr04_34311294	marker_locus	220.41 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_35654155	Chr04_35654154	marker_locus	221.74 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_31268757	Chr04_31268756	marker_locus	221.96 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_36931123	Chr04_36931122	marker_locus	222.17 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_17344516	Chr04_17344516	marker_locus	222.59 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_22122080	Chr04_22122079	marker_locus	223.01 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_29279206	Chr04_29279205	marker_locus	223.45 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_17101026	Chr04_17101025	marker_locus	223.88 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_31729451	Chr04_31729450	marker_locus	224.1 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_15924018	Chr04_15924017	marker_locus	224.54 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_29625664	Chr04_29625663	marker_locus	225.41 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_25805034	Chr04_25805033	marker_locus	226.51 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_21494001	Chr04_21494001	marker_locus	227.37 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_24683732	Chr04_24683732	marker_locus	228.02 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_29149007	Chr04_29149007	marker_locus	228.67 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C08_LG29	CSIRO_D5chr04_22865711	Chr04_22865711	marker_locus	229.95 cM

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Map QTL

This map contains 4 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	qPOLLENCL.MS-chr04	QTL	0 cM	19.03 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C06_LG21	qDTL.MS-chr06	QTL	32.33 cM	33.83 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C11_LG43	qDTL.MS-chr11	QTL	0 cM	13.55 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C15_LG04	qLFSP.MS-chr15	QTL	0 cM	8.8 cM	-

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MCU-5 x Siokra 1-4, RIL (2015 SNP)