MCU-5 x Siokra 1-4, RIL (2015 SNP) | Cottongen

Map Overview


Name	MCU-5 x Siokra 1-4, RIL (2015 SNP)
Species	Gossypium hirsutum
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1244
Number of QTL	4
Number of linkage groups	53
Publication	[view all]
Contact	N/A

Publication


Year	Publications
2014	Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.

Map Loci

This map contains 1,244 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_44699748	Chr08_44699748	marker_locus	178.68 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_43382085	Chr08_43382085	marker_locus	183.09 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_42932574	Chr08_42932573	marker_locus	184.83 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_42563358	Chr08_42563357	marker_locus	188.05 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_42159001	Chr08_42159001	marker_locus	190.51 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_39865497	Chr08_39865496	marker_locus	199.61 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_40006293	Chr08_40006293	marker_locus	199.82 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_49874458	Chr08_49874457	marker_locus	228.58 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_50782563	Chr08_50782563	marker_locus	231.23 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_52182686	Chr08_52182685	marker_locus	239.02 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5Chr08_52963951	Chr08_52963950	marker_locus	242.62 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_53888484	Chr08_53888483	marker_locus	247.98 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_54320892	Chr08_54320891	marker_locus	251.14 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_54189343	Chr08_54189342	marker_locus	258.01 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_54612322	Chr08_54612321	marker_locus	260.82 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_54737068	Chr08_54737067	marker_locus	261.31 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_55709396	Chr08_55709395	marker_locus	270.2 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_55409158	Chr08_55409157	marker_locus	271.49 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C26_LG50	CSIRO_D5chr08_55356183	Chr08_55356182	marker_locus	272.77 cM

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Map QTL

This map contains 4 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	qPOLLENCL.MS-chr04	QTL	0 cM	19.03 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C06_LG21	qDTL.MS-chr06	QTL	32.33 cM	33.83 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C11_LG43	qDTL.MS-chr11	QTL	0 cM	13.55 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C15_LG04	qLFSP.MS-chr15	QTL	0 cM	8.8 cM	-

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