MCU-5 x Siokra 1-4, RIL (2015 SNP)

Map Overview


Name	MCU-5 x Siokra 1-4, RIL (2015 SNP)
Species	Gossypium hirsutum
Genome group	AD
Map type	genetic
Map unit	cM
Number of loci	1244
Number of QTL	4
Number of linkage groups	53
Publication	[view all]
Contact	N/A

Publication


Year	Publications
2014	Zhu QH, Spriggs A, Taylor JM, Llewellyn D, Wilson I. Transcriptome and Complexity-Reduced-DNA Based Identification of Intraspecies Single Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L. G3 (Bethesda, Md.). 2014 Aug 7.

Map Loci

This map contains 1,244 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	CSIRO_D5chr12_7896325	Chr12_7896325	marker_locus	84.43 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_2789567	Chr09_2789566	marker_locus	0 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_1527739	Chr09_1527738	marker_locus	6.16 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_1758445	Chr09_1758444	marker_locus	8.41 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_2266305	Chr09_2266304	marker_locus	16.26 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_3589400	Chr09_3589400	marker_locus	20.9 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_4884613	Chr09_4884612	marker_locus	28.66 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_5006991	Chr09_5006990	marker_locus	30.19 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5Chr09_4402089	Chr09_4402088	marker_locus	35.9 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_4528089	Chr09_4528088	marker_locus	37.16 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_4715578	Chr09_4715577	marker_locus	41.07 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_5628705	Chr09_5628704	marker_locus	50.14 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_6862224	Chr09_6862224	marker_locus	58.42 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_7456467	Chr09_7456466	marker_locus	64.83 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_8974637	Chr09_8974637	marker_locus	72.58 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_8888764	Chr09_8888763	marker_locus	73.26 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_8705462	Chr09_8705461	marker_locus	76.24 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_9981830	Chr09_9981829	marker_locus	77.78 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_8343407	Chr09_8343406	marker_locus	79.97 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_7389962	Chr09_7389961	marker_locus	89.07 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_6646826	Chr09_6646826	marker_locus	94.99 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_6530150	Chr09_6530150	marker_locus	95.42 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_11107006	Chr09_11107005	marker_locus	113.82 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_11412701	Chr09_11412700	marker_locus	115.79 cM
MCU-5 x Siokra 1-4, RIL (2015 SNP).C05_LG17	CSIRO_D5chr09_11931027	Chr09_11931026	marker_locus	118.45 cM

Page

...

Last

Map QTL

This map contains 4 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
MCU-5 x Siokra 1-4, RIL (2015 SNP).C04_LG15	qPOLLENCL.MS-chr04	QTL	0 cM	19.03 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C06_LG21	qDTL.MS-chr06	QTL	32.33 cM	33.83 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C11_LG43	qDTL.MS-chr11	QTL	0 cM	13.55 cM	-
MCU-5 x Siokra 1-4, RIL (2015 SNP).C15_LG04	qLFSP.MS-chr15	QTL	0 cM	8.8 cM	-

Page

View Map

Search form

MCU-5 x Siokra 1-4, RIL (2015 SNP)