Limpopo

Germplasm Overview


Name	Limpopo
Alias	PI 607199 [view all 3]
GRIN ID	PI 607199
Type	Obsolete Cultivar
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 56]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
PI 607199
SA 2332
SA-2332

Image


File Name	Legend	Dataset
SA-2332_CS12-2724_IMG_4596_L.jpg	[SA-2332] leaf, College Station Plot# 2723, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_3404_LB.jpg	[SA-2332] leaf close up of the back surface, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_4325_F.jpg	[SA-2332] flower, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_4327_FO.jpg	[SA-2332] flower open, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6982_B.jpg	[SA-2332] green boll, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6983_BO.jpg	[SA-2332] boll open, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6984_BN.jpg	[SA-2332] boll showing nectaries, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 56 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, Before2006	leaf color	green	Not Available
2	NCGC germplasm evaluation, Before2006	lint color	white	Not Available
3	NCGC germplasm evaluation, CS12	boll color	green	US_TX_CS_2012	2724
4	NCGC germplasm evaluation, CS12	boll gossypol glands	heavy	US_TX_CS_2012	2724
5	NCGC germplasm evaluation, CS12	boll nectaries	reduced	US_TX_CS_2012	2724
6	NCGC germplasm evaluation, CS12	boll pitting	lightly pitted	US_TX_CS_2012	2724
7	NCGC germplasm evaluation, CS12	boll point	moderately pointed	US_TX_CS_2012	2724
8	NCGC germplasm evaluation, CS12	boll shape	cone oval	US_TX_CS_2012	2724
9	NCGC germplasm evaluation, CS12	boll size	medium	US_TX_CS_2012	2724
10	NCGC germplasm evaluation, CS12	bract color	sun red	US_TX_CS_2012	2724
11	NCGC germplasm evaluation, CS12	bract nectaries	present	US_TX_CS_2012	2724
12	NCGC germplasm evaluation, CS12	bract teeth size	large	US_TX_CS_2012	2724
13	NCGC germplasm evaluation, CS12	bract type	normal	US_TX_CS_2012	2724
14	NCGC germplasm evaluation, CS12	canopy type	typical	US_TX_CS_2012	2724
15	NCGC germplasm evaluation, CS12	leaf color	green	US_TX_CS_2012	2724
16	NCGC germplasm evaluation, CS12	leaf gossypol glands	medium	US_TX_CS_2012	2724
17	NCGC germplasm evaluation, CS12	leaf shape	normal	US_TX_CS_2012	2724
18	NCGC germplasm evaluation, CS12	leaf size	medium	US_TX_CS_2012	2724
19	NCGC germplasm evaluation, CS12	lint color	white	US_TX_CS_2012	2724
20	NCGC germplasm evaluation, CS12	petal color	cream	US_TX_CS_2012	2724
21	NCGC germplasm evaluation, CS12	petal spot	none	US_TX_CS_2012	2724
22	NCGC germplasm evaluation, CS12	plant shape	normal	US_TX_CS_2012	2724
23	NCGC germplasm evaluation, CS12	plot maturity	complete	US_TX_CS_2012	2724
24	NCGC germplasm evaluation, CS12	population homogeneity	uniform	US_TX_CS_2012	2724
25	NCGC germplasm evaluation, CS12	seed fuzz grade	high	US_TX_CS_2012	2724

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0094	genetic_marker	197\|249	dpl0094_197; dpl0094_249
2	NCGC_SNTD_SSR_genotype_2015	jespr0119	genetic_marker	118\|118	jespr0119_118; jespr0119_118
3	NCGC_SNTD_SSR_genotype_2015	cir0347	genetic_marker	236\|246	cir0347_236; cir0347_246
4	NCGC_SNTD_SSR_genotype_2015	cir0009	genetic_marker	222\|227	cir0009_222; cir0009_227
5	NCGC_SNTD_SSR_genotype_2015	bnl0530	genetic_marker	138\|142	bnl0530_138; bnl0530_142
6	NCGC_SNTD_SSR_genotype_2015	tmb1910	genetic_marker	193\|204	tmb1910_193; tmb1910_204
7	NCGC_SNTD_SSR_genotype_2015	gh107	genetic_marker	247\|247	gh107_247; gh107_247
8	NCGC_SNTD_SSR_genotype_2015	bnl0409	genetic_marker	98\|98	bnl0409_98; bnl0409_98
9	NCGC_SNTD_SSR_genotype_2015	dpl0196	genetic_marker	135\|166	dpl0196_135; dpl0196_166
10	NCGC_SNTD_SSR_genotype_2015	bnl1521	genetic_marker	166\|168\|170	bnl1521_166; bnl1521_168; bnl1521_170
11	NCGC_SNTD_SSR_genotype_2015	tmb1640	genetic_marker	196\|200\|226	tmb1640_196; tmb1640_200; tmb1640_226
12	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|240	dpl0541_206; dpl0541_240
13	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
14	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
15	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	191\|191	dpl0618_191; dpl0618_191
16	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
17	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|135	nau2277_123; nau2277_135
18	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198	bnl3985_169; bnl3985_198
19	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	165\|175\|179	cir0218_165; cir0218_175; cir0218_179
20	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	161\|167	jespr0291_161; jespr0291_167
21	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	169\|180	tmb1648_169; tmb1648_180
22	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
23	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	245\|245	dpl0405_245; dpl0405_245
24	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	165\|165	jespr0065_165; jespr0065_165
25	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171	gh537_168; gh537_171

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0016	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0020	A/C	C
3	TAMU_SNP63K_genotype	USDA_SNP0022	T/C	T
4	TAMU_SNP63K_genotype	USDA_SNP0026	G/T	-
5	TAMU_SNP63K_genotype	USDA_SNP0027	A/G	A
6	TAMU_SNP63K_genotype	USDA_SNP0039	C/T	T
7	TAMU_SNP63K_genotype	USDA_SNP0049	A/C	M
8	TAMU_SNP63K_genotype	USDA_SNP0057	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0064	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0070	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0073	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0074	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0075	A/G	G
14	TAMU_SNP63K_genotype	USDA_SNP0076	A/C	A
15	TAMU_SNP63K_genotype	USDA_SNP0077	A/G	G
16	TAMU_SNP63K_genotype	USDA_SNP0084	A/C	-
17	TAMU_SNP63K_genotype	USDA_SNP0085	C/T	-
18	TAMU_SNP63K_genotype	USDA_SNP0092	C/T	T
19	TAMU_SNP63K_genotype	USDA_SNP0102	C/T	C
20	TAMU_SNP63K_genotype	USDA_SNP0107	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0109	A/C	C
22	TAMU_SNP63K_genotype	USDA_SNP0111	G/T	T
23	TAMU_SNP63K_genotype	USDA_SNP0121	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0134	A/C	C
25	TAMU_SNP63K_genotype	USDA_SNP0136	G/T	T

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Cross References

External references for this accession


Database	Accession
GRIN	PI 607199

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 607199	GRIN:

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