Limpopo

Germplasm Overview


Name	Limpopo
Alias	PI 607199 [view all 3]
GRIN ID	PI 607199
Type	Obsolete Cultivar
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 56]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
PI 607199
SA 2332
SA-2332

Image


File Name	Legend	Dataset
SA-2332_CS12-2724_IMG_4596_L.jpg	[SA-2332] leaf, College Station Plot# 2723, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_3404_LB.jpg	[SA-2332] leaf close up of the back surface, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_4325_F.jpg	[SA-2332] flower, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_4327_FO.jpg	[SA-2332] flower open, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6982_B.jpg	[SA-2332] green boll, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6983_BO.jpg	[SA-2332] boll open, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)
SA-2332_CS12-2724_MG_6984_BN.jpg	[SA-2332] boll showing nectaries, College Station Plot# 2724, 2012	NCGC digital imaging (College Station, 2012)

Phenotypic Data

Total 56 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T09	plant height (m)	1.07	MX_CLM_TCM_2009	297
2	NCGC germplasm evaluation, T09	leaf nectaries	one, main vein	MX_CLM_TCM_2009	297
3	NCGC germplasm evaluation, T09	plot plant stand	1 plant	MX_CLM_TCM_2009	297
4	NCGC germplasm evaluation, T09	plot plant stand	1 plant	MX_CLM_TCM_2009	911
5	NCGC germplasm evaluation, T09	plot plant stand	1 plant	MX_CLM_TCM_2009	912
6	NCGC germplasm evaluation, T09	productiveness	37-48 per plant	MX_CLM_TCM_2009	297

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	154\|154	bnl2443_154; bnl2443_154
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	113\|156	bnl1495_113; bnl1495_156
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	191\|195	bnl2495_191; bnl2495_195
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	107\|107	gh283_107; gh283_107
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	146\|146	bnl3992_146; bnl3992_146
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|136\|138	bnl1531_116; bnl1531_121; bnl1531_136; bnl1531_138
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|190	bnl3644_185; bnl3644_190
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|194	bnl3371_168; bnl3371_194
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	117\|117	nau2140_117; nau2140_117
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|176	dpl0135_156; dpl0135_176
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|207	bnl0256_182; bnl0256_207
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	173\|178	tmb0043_173; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	153\|153	bnl2960_153; bnl2960_153
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	199\|203	tmb0836_199; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	210\|210	bnl3441_210; bnl3441_210
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	211\|211	bnl3580_211; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	190\|196	bnl1231_190; bnl1231_196
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|232	bnl3594_182; bnl3594_232
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	180\|180	tmb1421_180; tmb1421_180
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	203\|211	bnl4061_203; bnl4061_211
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	354\|354	bnl3650_354; bnl3650_354
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	180\|189	bnl3474_180; bnl3474_189
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	A
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	A
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	C
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	G
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	-

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Cross References

External references for this accession


Database	Accession
GRIN	PI 607199

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 607199	GRIN:

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