TX-1926

Germplasm Overview


Name	TX-1926
Alias	AS-417 [view all 3]
GRIN ID	PI 530557
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Colombia
Origin Detail	Colombia, Caldas
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 31]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: IRCT-UN-FAO
Reference	N/A

Alias


Synonym
AS-417
PI 530557
TEX 1926

Image


File Name	Legend	Dataset
TX-1926_CS17-1707_5D3_4028_LB.jpg	[TX-1926] leaf close up of the back surface, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)
TX-1926_CS17-1707_5D3_4029_ST.jpg	[TX-1926] stem, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)
TX-1926_CS17-1707_5D3_4571_BN.jpg	[TX-1926] boll showing nectaries, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)
TX-1926_CS17-1707_IMG_4807_ST.jpg	[TX-1926] stem, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)
TX-1926_CS17-1707_IMG_4808_L.jpg	[TX-1926] leaf, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)
TX-1926_CS17-1707_MG_2127_ST.jpg	[TX-1926] stem, College Station Plot-1707, 2017	NCGC digital imaging (College Station, 2017)

Phenotypic Data

Total 31 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012	748
2	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012	748
3	NCGC germplasm evaluation, T12	plant height (m)	1.37	MX_CLM_TCM_2012	748
4	NCGC germplasm evaluation, T12	leaf nectaries	one, main vein	MX_CLM_TCM_2012	748
5	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	748
6	NCGC germplasm evaluation, T12	productiveness	37-48 per plant	MX_CLM_TCM_2012	748

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
2	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
3	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	193\|193	dpl0618_193; dpl0618_193
4	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
5	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|135	nau2277_123; nau2277_135
6	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198\|215	bnl3985_169; bnl3985_198; bnl3985_215
7	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	146\|165\|179	cir0218_146; cir0218_165; cir0218_179
8	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	161\|167	jespr0291_161; jespr0291_167
9	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	169\|175\|183\|189	tmb1648_169; tmb1648_175; tmb1648_183; tmb1648_189
10	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
11	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	245\|251	dpl0405_245; dpl0405_251
12	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	150\|150	jespr0065_150; jespr0065_150
13	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|174	gh537_168; gh537_174
14	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	136\|136	cir0169_136; cir0169_136
15	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	223\|225	cir0081_223; cir0081_225
16	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	216\|239\|247	tmb2295_216; tmb2295_239; tmb2295_247
17	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	112\|128\|182\|192	bnl3545_112; bnl3545_128; bnl3545_182; bnl3545_192
18	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|205	mghes0076_192; mghes0076_205
19	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|219	cir0165_207; cir0165_219
20	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	238\|240	dpl0039_238; dpl0039_240
21	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	74\|74	gh495_74; gh495_74
22	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	214\|214	mghes0029_214; mghes0029_214
23	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	236\|236	tmb2018_236; tmb2018_236
24	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|163	jespr0220_127; jespr0220_163
25	NCGC_SNTD_SSR_genotype_2015	bnl4017	genetic_marker	221\|225	bnl4017_221; bnl4017_225

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0258	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0271	A/G	A
3	TAMU_SNP63K_genotype	USDA_SNP0278	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0286	A/G	G
5	TAMU_SNP63K_genotype	USDA_SNP0290	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0291	A/C	C
7	TAMU_SNP63K_genotype	USDA_SNP0298	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0304	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0306	C/T	-
10	TAMU_SNP63K_genotype	USDA_SNP0314	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0323	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0324	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0332	C/T	T
14	TAMU_SNP63K_genotype	USDA_SNP0337	C/T	C
15	TAMU_SNP63K_genotype	USDA_SNP0338	C/T	-
16	TAMU_SNP63K_genotype	USDA_SNP0357	A/G	A
17	TAMU_SNP63K_genotype	USDA_SNP0361	C/T	T
18	TAMU_SNP63K_genotype	USDA_SNP0363	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0365	C/T	-
20	TAMU_SNP63K_genotype	USDA_SNP0368	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0370	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0377	A/G	G
23	TAMU_SNP63K_genotype	USDA_SNP0379	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0382	A/G	A
25	TAMU_SNP63K_genotype	USDA_SNP0385	A/C	C

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-1926
GRIN	PI 530557

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 530557	GRIN:
NCGC Cotton Race Collection (USA)	TX-1926

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