TX-0390

Germplasm Overview


Name	TX-0390
Alias	PI 529807 [view all 3]
GRIN ID	PI 529807
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	El Salvador
Origin Detail	El Salvador
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 40]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	collect: J. EADIE, COOPERATIVA ALGODONERA
Reference	N/A

Alias


Synonym
PI 529807
TEX 390
TX 390

Image


File Name	Legend	Dataset
TX-0390_CS16-1423_5D3_6903_ST.JPG	[TX-0390] stem, College Station Plot-1423, 2016	NCGC digital imaging (College Station, 2016)
TX-0390_CS16-1423_5D3_6904_L.JPG	[TX-0390] leaf, College Station Plot-1423, 2016	NCGC digital imaging (College Station, 2016)
TX-0390_CS16-1423_IMG_1047_L.JPG	[TX-0390] leaf, College Station Plot-1423, 2016	NCGC digital imaging (College Station, 2016)
TX-0390_CS16-1423_MG_6611_LB.JPG	[TX-0390] leaf close up of the back surface, College Station Plot-1423, 2016	NCGC digital imaging (College Station, 2016)
TX-0390_CS16-1423_MG_6612_ST.JPG	[TX-0390] stem, College Station Plot-1423, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Total 40 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	lint color	white	MX_CLM_TCM_2012	V-0270
2	NCGC germplasm evaluation, T12	petal color	yellow	MX_CLM_TCM_2012	V-0270
3	NCGC germplasm evaluation, T12	petal spot	medium	MX_CLM_TCM_2012	V-0270
4	NCGC germplasm evaluation, T12	photoperiod	open bolls	MX_CLM_TCM_2012	V-0270
5	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0270
6	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	V-0270
7	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	V-0270
8	NCGC germplasm evaluation, T12	stem gossypol glands	heavy	MX_CLM_TCM_2012	V-0270
9	NCGC germplasm evaluation, T12	stigma exsertion	normal	MX_CLM_TCM_2012	V-0270
10	NCGC germplasm evaluation, T12	trichome density on leaf	few	MX_CLM_TCM_2012	V-0270
11	NCGC germplasm evaluation, T12	trichome density on stem	few	MX_CLM_TCM_2012	V-0270
12	NCGC germplasm evaluation, T12	plant height (m)	1.68	MX_CLM_TCM_2012	V-0270
13	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012	V-0270
14	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	V-0270
15	NCGC germplasm evaluation, T12	productiveness	25-36 per plant	MX_CLM_TCM_2012	V-0270

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
2	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
3	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	193\|193	dpl0618_193; dpl0618_193
4	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
5	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|123	nau2277_123; nau2277_123
6	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|189\|198	bnl3985_169; bnl3985_189; bnl3985_198
7	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	167\|175\|179	cir0218_167; cir0218_175; cir0218_179
8	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	161\|167	jespr0291_161; jespr0291_167
9	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	173\|183\|189	tmb1648_173; tmb1648_183; tmb1648_189
10	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
11	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	248\|248	dpl0405_248; dpl0405_248
12	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	133\|133	jespr0065_133; jespr0065_133
13	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171	gh537_168; gh537_171
14	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	136\|136	cir0169_136; cir0169_136
15	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	223\|223	cir0081_223; cir0081_223
16	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	216\|230	tmb2295_216; tmb2295_230
17	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	114\|138\|184	bnl3545_114; bnl3545_138; bnl3545_184
18	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|219	mghes0076_192; mghes0076_219
19	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|217	cir0165_207; cir0165_217
20	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	234\|238	dpl0039_234; dpl0039_238
21	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	74\|74	gh495_74; gh495_74
22	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	214\|214	mghes0029_214; mghes0029_214
23	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	236\|236	tmb2018_236; tmb2018_236
24	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|163	jespr0220_127; jespr0220_163
25	NCGC_SNTD_SSR_genotype_2015	bnl4017	genetic_marker	221\|239	bnl4017_221; bnl4017_239

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0258	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0271	A/G	A
3	TAMU_SNP63K_genotype	USDA_SNP0278	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0286	A/G	G
5	TAMU_SNP63K_genotype	USDA_SNP0290	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0291	A/C	-
7	TAMU_SNP63K_genotype	USDA_SNP0298	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0304	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0306	C/T	-
10	TAMU_SNP63K_genotype	USDA_SNP0314	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0323	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0324	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0332	C/T	T
14	TAMU_SNP63K_genotype	USDA_SNP0337	C/T	C
15	TAMU_SNP63K_genotype	USDA_SNP0338	C/T	-
16	TAMU_SNP63K_genotype	USDA_SNP0357	A/G	A
17	TAMU_SNP63K_genotype	USDA_SNP0361	C/T	T
18	TAMU_SNP63K_genotype	USDA_SNP0363	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0365	C/T	-
20	TAMU_SNP63K_genotype	USDA_SNP0368	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0370	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0377	A/G	G
23	TAMU_SNP63K_genotype	USDA_SNP0379	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0382	A/G	A
25	TAMU_SNP63K_genotype	USDA_SNP0385	A/C	-

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0390
GRIN	PI 529807

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 529807	GRIN:
NCGC Cotton Race Collection (USA)	TX-0390

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