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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr10-2 | CCRI0049 | CCRG049 | marker_locus | 28.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-2 | NAU2317 | NAU2317 | marker_locus | 38.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-2 | DPL0533 | MON_DPL0533 | marker_locus | 54.7 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-3 | me_TAT/em_TTG | TATTTG-400 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-3 | me_GTT/em_TTG | GTTTTG-150 | marker_locus | 10.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-3 | CGR5399 | MON_CGR5399 | marker_locus | 29 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-3 | HAU3466 | HAU3466 | marker_locus | 35.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | me_GTA/em_AGC | GTAAGC-350 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU1592 | HAU1592 | marker_locus | 16.86 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | NAU5428 | nau5428 | marker_locus | 21.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | me_GCA/em_TCA | GCATCA-970 | marker_locus | 24.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU-DJ-S294 | HAU-DJ-S294 | marker_locus | 26.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | BNL1231 | BNL1231 | marker_locus | 27.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | me_GGA/em_CAC | GGACAC-1050 | marker_locus | 30.49 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU-D5108 | HAU-D5108-SSCP | marker_locus | 37.62 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | Gh196 | Gr-Gh196 | marker_locus | 42.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | me_AAA/em_ACC | AAAACC-500 | marker_locus | 46.1 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU4514 | HAU4514 | marker_locus | 49.95 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | NAU3493 | nau3493 | marker_locus | 52.03 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU0393 | HAU0393 | marker_locus | 60.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | BNL3592 | BNL3592 | marker_locus | 65.36 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | CGR6517 | MON_CGR6517 | marker_locus | 72.23 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | HAU-D5394 | HAU-D5394 | marker_locus | 88.93 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | CER0035 | MON_CER0035 | marker_locus | 89.35 cM |
DH962 X Ji Mian 5, F2 (2015).chr11 | me_GGA/em_GCT | GGAGCT-320 | marker_locus | 89.93 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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