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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr01 | TMB0375 | tmb0375 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | me_CTA/em_CCC | CTACCC-250 | marker_locus | 16.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | NBRI_HQ527566 | NBRI_HQ527566 | marker_locus | 18.45 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | me_CAC/em_TCT | CACTCT-750 | marker_locus | 19.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | CGR5875 | MON_CGR5875 | marker_locus | 21.76 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | MUSB1267 | musb1267 | marker_locus | 22.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | NAU2165 | NAU2165 | marker_locus | 23.23 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | DPL0300 | DPL0300 | marker_locus | 24.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | NBRI_e1783 | NBRI_HQ527317 | marker_locus | 25.99 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | HAU2102 | HAU2102b | marker_locus | 28.16 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | HAU-D5398 | HAU-D5398 | marker_locus | 28.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | NAU4044 | NAU4044 | marker_locus | 28.63 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | DPL0437 | MON_DPL0437 | marker_locus | 29.16 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | BNL2599 | BNL2599 | marker_locus | 29.39 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | NAU3083 | NAU3083 | marker_locus | 30.17 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | HAU2102 | HAU2102a | marker_locus | 31.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | me_ACC/em_AGC | ACCAGC-300 | marker_locus | 32.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | CIR0307 | CIR307 | marker_locus | 32.91 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | me_ACC/em_CTG | ACCCTG-600 | marker_locus | 33.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | COT059 | MON_COT059 | marker_locus | 33.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | CIR0234 | CIR234 | marker_locus | 33.82 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | BNL2920 | BNL2920 | marker_locus | 34.46 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | HAU-DJ-S003 | HAU-DJ-S003 | marker_locus | 34.66 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | HAU-J6039 | HAU-J6039 | marker_locus | 35.1 cM |
DH962 X Ji Mian 5, F2 (2015).chr01 | me_ACC/em_AAC | ACCAAC-350 | marker_locus | 37.51 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qBN.DJiM-F2_chr20.1 | QTL | 62.52 cM | 77.27 cM | 74.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr20 | qBN.DJiM-F2_chr20.2 | QTL | 96.32 cM | 131.51 cM | 107.68 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qBWT.DJiM-F2_chr07-1.1 | QTL | 51.8 cM | 61 cM | 56.79 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qBWT.DJiM-F2_chr07-1.2 | QTL | 61 cM | 68.11 cM | 61.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qFEL.DJiM-F2_chr22.1 | QTL | 17.2 cM | 21.46 cM | 17.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qFEL.DJiM-F2_chr22.2 | QTL | 21.46 cM | 37.66 cM | 32.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr10-1 | qFL.DJiM-F2_chr10-1 | QTL | 0 cM | 25.28 cM | 6.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-1 | qFL.DJiM-F2_chr14-1 | QTL | 69.56 cM | 73.25 cM | 72.77 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-2 | qFL.DJiM-F2_chr21-2 | QTL | 78.73 cM | 84.95 cM | 83.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | qFS.DJiM-F2_chr07-2.1 | QTL | 24.18 cM | 39.73 cM | 38.19 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-2 | qFS.DJiM-F2_chr07-2.2 | QTL | 39.73 cM | 50.36 cM | 41.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr16 | qFS.DJiM-F2_chr16.1 | QTL | 24.18 cM | 39.73 cM | 38.19 cM |
DH962 X Ji Mian 5, F2 (2015).chr16 | qFS.DJiM-F2_chr16.2 | QTL | 39.73 cM | 50.36 cM | 41.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | qLI.DJiM-F2_chr09-1 | QTL | 39.24 cM | 50.7 cM | 45.69 cM |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLI.DJiM-F2_chr20 | QTL | 24.93 cM | 50.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr23 | qLI.DJiM-F2_chr23 | QTL | 39.24 cM | 50.7 cM | 45.69 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | qLI.DJiM-F2_chr25-2.1 | QTL | 9.04 cM | 14.8 cM | 11.39 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-2 | qLI.DJiM-F2_chr25-2.2 | QTL | 14.8 cM | 26.74 cM | 21.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | qLP.DJiM-F2_chr13-1 | QTL | 15.51 cM | 21.69 cM | 19.28 cM |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLP.DJiM-F2_chr20 | QTL | 79.5 cM | 93.4 cM | 83.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qLY.DJiM-F2_chr08.1 | QTL | 47.27 cM | 48.13 cM | 47.7 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qLY.DJiM-F2_chr08.2 | QTL | 48.13 cM | 48.67 cM | 48.45 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qLY.DJiM-F2_chr08.3 | QTL | 49.28 cM | 49.65 cM | 49.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qLY.DJiM-F2_chr08.4 | QTL | 52.6 cM | 52.78 cM | 52.72 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qLY.DJiM-F2_chr08.5 | QTL | 56.15 cM | 56.48 cM | 56.16 cM |
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