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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GGA/em_CGG | GGACGG-350 | marker_locus | 32.97 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GGA/em_CAC | GGACAC-530 | marker_locus | 32.97 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GGA/em_CCA | GGACCA-1000 | marker_locus | 32.98 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_CAG/em_TCT | CAGTCT-270 | marker_locus | 33.26 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_TAG/em_TCA | TAGTCA-300 | marker_locus | 33.57 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GGA/em_TAG | GGATAG-400 | marker_locus | 33.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GGA/em_TAT | GGATAT-480 | marker_locus | 34.36 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_CCA/em_TAT | CCATAT-680 | marker_locus | 34.79 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_CAT/em_AGC | CATAGC-250 | marker_locus | 35.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | HAU-DJ-I068 | HAU-DJ-I068b | marker_locus | 36.05 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_ATA/em_CTG | ATACTG-700 | marker_locus | 37.26 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | JESPR0153 | JESPR153 | marker_locus | 37.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | DPL0535 | MON_DPL0535 | marker_locus | 37.93 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | HAU-J6071 | HAU-J6071-SSCP | marker_locus | 38.03 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | BNL0861 | BNL861 | marker_locus | 38.17 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_AAC/em_TTA | AACTTA-200 | marker_locus | 38.24 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GCT/em_CAT | GCTCAT-1050 | marker_locus | 39.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | HAU-DJ-I068 | HAU-DJ-I068a | marker_locus | 40.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | me_GTT/em_TAG | GTTTAG-210 | marker_locus | 40.91 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | S0277 | S277a | marker_locus | 43.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | S0277a | S277a | marker_locus | 43.73 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | DPL0161 | MON_DPL0161 | marker_locus | 45.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | DC40150 | MON_DC40150 | marker_locus | 47.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | HAU-J5951 | HAU-J5951 | marker_locus | 50.31 cM |
DH962 X Ji Mian 5, F2 (2015).chr13-1 | CER0005 | MON_CER0005 | marker_locus | 50.7 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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