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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-D5528 | HAU-D5528 | marker_locus | 32.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-DJ-S253 | HAU-DJ-S253 | marker_locus | 34.98 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_AGG/em_CAT | AGGCAT-750 | marker_locus | 36.81 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | TMB0670 | TMB0670 | marker_locus | 39.24 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_AAC/em_GTC | AACGTC-700 | marker_locus | 45.68 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_AAC/em_GTC | AACGTC-400 | marker_locus | 45.68 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU1792 | HAU1792 | marker_locus | 50.7 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | CGR6576 | MON_CGR6576 | marker_locus | 52.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU1918 | HAU1918 | marker_locus | 52.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | CGR5110 | MON_CGR5110 | marker_locus | 61.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | NAU2658 | nau2658 | marker_locus | 68.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | CGR6252 | MON_CGR6252 | marker_locus | 70.86 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-DJ-I058 | HAU-DJ-I058 | marker_locus | 73.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | NBRI_e1667 | NBRI_HQ526877 | marker_locus | 74.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-D5159 | HAU-D5159 | marker_locus | 76.33 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | Gh394 | GhPIP394 | marker_locus | 76.9 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-DJ-S254 | HAU-DJ-S254 | marker_locus | 77.86 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | NBRI_gB007 | NBRI_HQ524340 | marker_locus | 78.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | NAU6984 | NAU6984 | marker_locus | 79.4 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_AAG/em_TAT | AAGTAT-220 | marker_locus | 80.04 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU2146 | HAU2146 | marker_locus | 80.81 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | JESPR0248 | JESPR248 | marker_locus | 81.03 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-D5208 | HAU-D5208 | marker_locus | 82.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU3241 | HAU3241 | marker_locus | 82.21 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | TMB0382 | tmb0382 | marker_locus | 82.23 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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