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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAT/em_GGT | CATGGT-1400 | marker_locus | 60.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | DPL0877 | MON_DPL0877 | marker_locus | 60.69 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_TCA/em_ACA | TCAACA-460 | marker_locus | 61.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CTT/em_AGT | CTTAGT-900 | marker_locus | 61.91 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_CAC/em_TAT | CACTAT-1200 | marker_locus | 62.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | PTOKIN3 | PTOKIN3-700 | marker_locus | 67.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | HAU-J5695 | HAU-J5695-SSCP | marker_locus | 69.06 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_ACC/em_TAC | ACCTAC-280 | marker_locus | 70.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | me_GAA/em_GTA | GAAGTA-500 | marker_locus | 75.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-DJ-S165 | HAU-DJ-S165 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-D5235 | HAU-D5235 | marker_locus | 6.75 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_ACC/em_GGT | ACCGGT-500 | marker_locus | 10.23 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_CGA/em_GGT | CGAGGT-420 | marker_locus | 11.82 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_ATG/em_TTA | ATGTTA-500 | marker_locus | 13.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | Gh539 | Gh539 | marker_locus | 14.87 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_CAC/em_GTG | CACGTG-800 | marker_locus | 16.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-DJ-S166 | HAU-DJ-S166 | marker_locus | 17.49 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | HAU-J6230 | HAU-J6230 | marker_locus | 18.82 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | NAU3159 | NAU3159 | marker_locus | 20.39 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | BNL3383 | BNL3383 | marker_locus | 21.57 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_CGA/em_GGT | CGAGGT-200 | marker_locus | 22.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_CAA/em_CAA | CAACAA-1000 | marker_locus | 24.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_AGT/em_GCA | AGTGCA-600 | marker_locus | 26.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_ACG/em_ATT | ACGATT-800 | marker_locus | 27.07 cM |
DH962 X Ji Mian 5, F2 (2015).chr09-1 | me_TCA/em_GTC | TCAGTC-300 | marker_locus | 32.04 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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