TX-0097

Germplasm Overview


Name	TX-0097
Alias	CB 2141 [view all 7]
GRIN ID	PI 163612
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	Upland type
Origin Country	Guatemala
Origin Detail	Guatemala, Jutiapa
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 40]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 2141
MW13
NSSL 3508
PI 163612
TEX 97
TX 97
NSL 3508

Image


File Name	Legend	Dataset
TX-0097_CS16-0720_5D3_5012_F.JPG	[TX-0097] flower, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_5013_B.JPG	[TX-0097] green boll, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_5014_FO.JPG	[TX-0097] flower open, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_5015_B.JPG	[TX-0097] green boll, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_5016_BN.JPG	[TX-0097] boll showing nectaries, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_5017_ST.JPG	[TX-0097] stem, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_5D3_8736_BO.JPG	[TX-0097] boll open, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_IMG_0304_L.JPG	[TX-0097] leaf, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_MG_5508_LB.JPG	[TX-0097] leaf close up of the back surface, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)
TX-0097_CS16-0720_MG_5509_ST.JPG	[TX-0097] stem, College Station Plot-0720, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Total 40 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	lint color	white	MX_CLM_TCM_2012	V-0060
2	NCGC germplasm evaluation, T12	petal color	cream	MX_CLM_TCM_2012	V-0060
3	NCGC germplasm evaluation, T12	petal spot	none	MX_CLM_TCM_2012	V-0060
4	NCGC germplasm evaluation, T12	photoperiod	open bolls	MX_CLM_TCM_2012	V-0060
5	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	V-0060
6	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	V-0060
7	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	V-0060
8	NCGC germplasm evaluation, T12	stem gossypol glands	medium	MX_CLM_TCM_2012	V-0060
9	NCGC germplasm evaluation, T12	stigma exsertion	normal	MX_CLM_TCM_2012	V-0060
10	NCGC germplasm evaluation, T12	trichome density on leaf	moderate	MX_CLM_TCM_2012	V-0060
11	NCGC germplasm evaluation, T12	trichome density on stem	moderate	MX_CLM_TCM_2012	V-0060
12	NCGC germplasm evaluation, T12	plant height (m)	1.07	MX_CLM_TCM_2012	V-0060
13	NCGC germplasm evaluation, T12	leaf nectaries	one, main vein	MX_CLM_TCM_2012	V-0060
14	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	V-0060
15	NCGC germplasm evaluation, T12	productiveness	25-36 per plant	MX_CLM_TCM_2012	V-0060

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0541	genetic_marker	206\|224	dpl0541_206; dpl0541_224
2	NCGC_SNTD_SSR_genotype_2015	gh052	genetic_marker	133\|133	gh052_133; gh052_133
3	NCGC_SNTD_SSR_genotype_2015	bnl2544	genetic_marker	216\|216	bnl2544_216; bnl2544_216
4	NCGC_SNTD_SSR_genotype_2015	dpl0618	genetic_marker	193\|193	dpl0618_193; dpl0618_193
5	NCGC_SNTD_SSR_genotype_2015	cir0202	genetic_marker	177\|177	cir0202_177; cir0202_177
6	NCGC_SNTD_SSR_genotype_2015	nau2277	genetic_marker	123\|123	nau2277_123; nau2277_123
7	NCGC_SNTD_SSR_genotype_2015	bnl3985	genetic_marker	169\|198	bnl3985_169; bnl3985_198
8	NCGC_SNTD_SSR_genotype_2015	cir0218	genetic_marker	146\|182\|190	cir0218_146; cir0218_182; cir0218_190
9	NCGC_SNTD_SSR_genotype_2015	jespr0291	genetic_marker	167\|167	jespr0291_167; jespr0291_167
10	NCGC_SNTD_SSR_genotype_2015	tmb1648	genetic_marker	175\|186	tmb1648_175; tmb1648_186
11	NCGC_SNTD_SSR_genotype_2015	jespr0293	genetic_marker	87\|92	jespr0293_87; jespr0293_92
12	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	242\|242	dpl0405_242; dpl0405_242
13	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	165\|165	jespr0065_165; jespr0065_165
14	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171	gh537_168; gh537_171
15	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	134\|134	cir0169_134; cir0169_134
16	NCGC_SNTD_SSR_genotype_2015	cir0081	genetic_marker	221\|221	cir0081_221; cir0081_221
17	NCGC_SNTD_SSR_genotype_2015	tmb2295	genetic_marker	226\|226	tmb2295_226; tmb2295_226
18	NCGC_SNTD_SSR_genotype_2015	bnl3545	genetic_marker	114\|118\|192	bnl3545_114; bnl3545_118; bnl3545_192
19	NCGC_SNTD_SSR_genotype_2015	mghes0076	genetic_marker	192\|203	mghes0076_192; mghes0076_203
20	NCGC_SNTD_SSR_genotype_2015	cir0165	genetic_marker	207\|219	cir0165_207; cir0165_219
21	NCGC_SNTD_SSR_genotype_2015	dpl0039	genetic_marker	234\|238	dpl0039_234; dpl0039_238
22	NCGC_SNTD_SSR_genotype_2015	gh495	genetic_marker	80\|80	gh495_80; gh495_80
23	NCGC_SNTD_SSR_genotype_2015	mghes0029	genetic_marker	208\|208	mghes0029_208; mghes0029_208
24	NCGC_SNTD_SSR_genotype_2015	tmb2018	genetic_marker	260\|260	tmb2018_260; tmb2018_260
25	NCGC_SNTD_SSR_genotype_2015	jespr0220	genetic_marker	127\|144	jespr0220_127; jespr0220_144

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0258	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0271	A/G	A
3	TAMU_SNP63K_genotype	USDA_SNP0278	G/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0286	A/G	G
5	TAMU_SNP63K_genotype	USDA_SNP0290	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0291	A/C	-
7	TAMU_SNP63K_genotype	USDA_SNP0298	C/T	C
8	TAMU_SNP63K_genotype	USDA_SNP0304	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0306	C/T	-
10	TAMU_SNP63K_genotype	USDA_SNP0314	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0323	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0324	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0332	C/T	T
14	TAMU_SNP63K_genotype	USDA_SNP0337	C/T	C
15	TAMU_SNP63K_genotype	USDA_SNP0338	C/T	-
16	TAMU_SNP63K_genotype	USDA_SNP0357	A/G	A
17	TAMU_SNP63K_genotype	USDA_SNP0361	C/T	T
18	TAMU_SNP63K_genotype	USDA_SNP0363	A/G	A
19	TAMU_SNP63K_genotype	USDA_SNP0365	C/T	-
20	TAMU_SNP63K_genotype	USDA_SNP0368	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0370	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0377	A/G	G
23	TAMU_SNP63K_genotype	USDA_SNP0379	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0382	A/G	A
25	TAMU_SNP63K_genotype	USDA_SNP0385	A/C	C

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0097
GRIN	PI 163612

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 163612	GRIN:
NCGC Cotton Race Collection (USA)	TX-0097

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