TX-0040

Germplasm Overview


Name	TX-0040
Alias	CB 1801 [view all 8]
GRIN ID	PI 549150
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Mexico
Origin Detail	Mexico, Chiapas
Pedigree	Selection from 154052
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 62]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 1801
M#74a
No. 74a
NSSL 3460
PI 549150
TEX 40
TX 40
NSL 3460

Image


File Name	Legend	Dataset
TX-0040_T12-222_MG_9822_L.jpg	[TX-0040] leaf, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_MG_9536_LB.jpg	[TX-0040] leaf close up of the back surface, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0333_BN.jpg	[TX-0040] boll showing nectaries, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0332_FO.jpg	[TX-0040] flower open, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0331_B.jpg	[TX-0040] green boll, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0330_F.jpg	[TX-0040] flower, Tecoman Plot# 220, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_CS09_IMG_1146_L.jpg	[TX-0040] leaf, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_1147_BO.jpg	[TX-0040] boll open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6111_LB.jpg	[TX-0040] leaf close up of the back surface, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6112_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6488_FO.jpg	[TX-0040] flower open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09-1206_IMG_2615_LB.jpg	[TX-0040] leaf close up of the back surface, College Station Plot-1206, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05197_P.jpg	[TX-0040] whole plant, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05198_L.jpg	[TX-0040] leaf, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05199_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05200_BO.jpg	[TX-0040] boll open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_1145_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS16-0605_5D3_8666_BO.JPG	[TX-0040] boll open, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_IMG_0207_L.JPG	[TX-0040] leaf, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_MG_5367_LB.JPG	[TX-0040] leaf close up of the back surface, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_MG_5368_ST.JPG	[TX-0040] stem, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4808_ST.JPG	[TX-0040] stem, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4807_BN.JPG	[TX-0040] boll showing nectaries, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4806_B.JPG	[TX-0040] green boll, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4805_FO.JPG	[TX-0040] flower open, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4804_B.JPG	[TX-0040] green boll, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4803_F.JPG	[TX-0040] flower, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Total 62 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, Before2006	leaf shape	normal	Not Available
2	NCGC germplasm evaluation, Before2006	lint color	white	Not Available
3	NCGC germplasm evaluation, Before2006	plot maturity	complete	Not Available
4	NCGC germplasm evaluation, Before2006	trichome density on leaf	few	Not Available
5	NCGC germplasm evaluation, Before2006	plant height (m)	0.9	Not Available
6	NCGC germplasm evaluation, Before2006	productiveness	25-36 per plant	Not Available
7	NCGC germplasm evaluation, CS09	boll gossypol glands	medium	US_TX_CS_2009	1206
8	NCGC germplasm evaluation, CS09	boll nectaries	present	US_TX_CS_2009	1206
9	NCGC germplasm evaluation, CS09	boll point	blunt	US_TX_CS_2009	1206
10	NCGC germplasm evaluation, CS09	boll shape	oval	US_TX_CS_2009	1206
11	NCGC germplasm evaluation, CS09	bract color	green	US_TX_CS_2009	1206
12	NCGC germplasm evaluation, CS09	bract nectaries	present	US_TX_CS_2009	1206
13	NCGC germplasm evaluation, CS09	bract teeth size	medium	US_TX_CS_2009	1206
14	NCGC germplasm evaluation, CS09	bract type	normal	US_TX_CS_2009	1206
15	NCGC germplasm evaluation, CS09	leaf color	green	US_TX_CS_2009	1206
16	NCGC germplasm evaluation, CS09	leaf gossypol glands	medium	US_TX_CS_2009	1206
17	NCGC germplasm evaluation, CS09	leaf shape	normal	US_TX_CS_2009	1206
18	NCGC germplasm evaluation, CS09	lint color	white	US_TX_CS_2009	1206
19	NCGC germplasm evaluation, CS09	plant shape	normal	US_TX_CS_2009	1206
20	NCGC germplasm evaluation, CS09	plot maturity	more than half open	US_TX_CS_2009	1206
21	NCGC germplasm evaluation, CS09	stem color	sun red	US_TX_CS_2009	1206
22	NCGC germplasm evaluation, CS09	stem gossypol glands	medium	US_TX_CS_2009	1206
23	NCGC germplasm evaluation, CS09	trichome density on leaf	few	US_TX_CS_2009	1206
24	NCGC germplasm evaluation, CS09	trichome density on stem	few	US_TX_CS_2009	1206
25	NCGC germplasm evaluation, CS09	E1 (%)	5.1	US_TX_CS_2009	1206

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0094	genetic_marker	197\|243	dpl0094_197; dpl0094_243
2	NCGC_SNTD_SSR_genotype_2015	dpl0520	genetic_marker	187\|195	dpl0520_187; dpl0520_195
3	NCGC_SNTD_SSR_genotype_2015	stv0023	genetic_marker	140\|145	stv0023_140; stv0023_145
4	NCGC_SNTD_SSR_genotype_2015	bnl2496	genetic_marker	145\|150	bnl2496_145; bnl2496_150
5	NCGC_SNTD_SSR_genotype_2015	bnl0569	genetic_marker	135\|137	bnl0569_135; bnl0569_137
6	NCGC_SNTD_SSR_genotype_2015	cir0307	genetic_marker	167\|167	cir0307_167; cir0307_167
7	NCGC_SNTD_SSR_genotype_2015	bnl1417	genetic_marker	97\|97	bnl1417_97; bnl1417_97
8	NCGC_SNTD_SSR_genotype_2015	cir0203	genetic_marker	257\|257	cir0203_257; cir0203_257
9	NCGC_SNTD_SSR_genotype_2015	dpl0600	genetic_marker	168\|168	dpl0600_168; dpl0600_168
10	NCGC_SNTD_SSR_genotype_2015	tmb0514	genetic_marker	193\|197	tmb0514_193; tmb0514_197
11	NCGC_SNTD_SSR_genotype_2015	bnl4030	genetic_marker	114\|114	bnl4030_114; bnl4030_114
12	NCGC_SNTD_SSR_genotype_2015	bnl4071	genetic_marker	213\|232	bnl4071_213; bnl4071_232
13	NCGC_SNTD_SSR_genotype_2015	jespr0008	genetic_marker	282\|282	jespr0008_282; jespr0008_282
14	NCGC_SNTD_SSR_genotype_2015	tmb0382	genetic_marker	179\|179	tmb0382_179; tmb0382_179
15	NCGC_SNTD_SSR_genotype_2015	bnl0387	genetic_marker	210\|212	bnl0387_210; bnl0387_212
16	NCGC_SNTD_SSR_genotype_2015	jespr0300	genetic_marker	198\|207	jespr0300_198; jespr0300_207
17	NCGC_SNTD_SSR_genotype_2015	tmb1295	genetic_marker	220\|220	tmb1295_220; tmb1295_220
18	NCGC_SNTD_SSR_genotype_2015	tmb0799	genetic_marker	150\|178	tmb0799_150; tmb0799_178
19	NCGC_SNTD_SSR_genotype_2015	jespr0153	genetic_marker	101\|158	jespr0153_101; jespr0153_158
20	NCGC_SNTD_SSR_genotype_2015	gh048	genetic_marker	85\|85	gh048_85; gh048_85
21	NCGC_SNTD_SSR_genotype_2015	bnl1551	genetic_marker	174\|174	bnl1551_174; bnl1551_174
22	NCGC_SNTD_SSR_genotype_2015	bnl2572	genetic_marker	253\|253	bnl2572_253; bnl2572_253
23	NCGC_SNTD_SSR_genotype_2015	cir0286	genetic_marker	124\|130	cir0286_124; cir0286_130
24	NCGC_SNTD_SSR_genotype_2015	jespr0274	genetic_marker	101\|119	jespr0274_101; jespr0274_119
25	NCGC_SNTD_SSR_genotype_2015	dpl0168	genetic_marker	213\|236	dpl0168_213; dpl0168_236

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0016	C/T	T
2	TAMU_SNP63K_genotype	USDA_SNP0020	A/C	C
3	TAMU_SNP63K_genotype	USDA_SNP0022	T/C	T
4	TAMU_SNP63K_genotype	USDA_SNP0026	G/T	-
5	TAMU_SNP63K_genotype	USDA_SNP0027	A/G	A
6	TAMU_SNP63K_genotype	USDA_SNP0039	C/T	T
7	TAMU_SNP63K_genotype	USDA_SNP0049	A/C	M
8	TAMU_SNP63K_genotype	USDA_SNP0057	C/T	C
9	TAMU_SNP63K_genotype	USDA_SNP0064	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0070	C/T	C
11	TAMU_SNP63K_genotype	USDA_SNP0073	A/G	G
12	TAMU_SNP63K_genotype	USDA_SNP0074	A/G	A
13	TAMU_SNP63K_genotype	USDA_SNP0075	A/G	G
14	TAMU_SNP63K_genotype	USDA_SNP0076	A/C	C
15	TAMU_SNP63K_genotype	USDA_SNP0077	A/G	G
16	TAMU_SNP63K_genotype	USDA_SNP0084	A/C	-
17	TAMU_SNP63K_genotype	USDA_SNP0085	C/T	-
18	TAMU_SNP63K_genotype	USDA_SNP0092	C/T	T
19	TAMU_SNP63K_genotype	USDA_SNP0102	C/T	C
20	TAMU_SNP63K_genotype	USDA_SNP0107	A/C	A
21	TAMU_SNP63K_genotype	USDA_SNP0109	A/C	-
22	TAMU_SNP63K_genotype	USDA_SNP0111	G/T	T
23	TAMU_SNP63K_genotype	USDA_SNP0121	A/G	A
24	TAMU_SNP63K_genotype	USDA_SNP0134	A/C	C
25	TAMU_SNP63K_genotype	USDA_SNP0136	G/T	T

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0040
GRIN	PI 549150

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 549150	GRIN:
NCGC Cotton Race Collection (USA)	TX-0040

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