TX-0040

Germplasm Overview


Name	TX-0040
Alias	CB 1801 [view all 8]
GRIN ID	PI 549150
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Mexico
Origin Detail	Mexico, Chiapas
Pedigree	Selection from 154052
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 62]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 1801
M#74a
No. 74a
NSSL 3460
PI 549150
TEX 40
TX 40
NSL 3460

Image


File Name	Legend	Dataset
TX-0040_T12-222_MG_9822_L.jpg	[TX-0040] leaf, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_MG_9536_LB.jpg	[TX-0040] leaf close up of the back surface, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0333_BN.jpg	[TX-0040] boll showing nectaries, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0332_FO.jpg	[TX-0040] flower open, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0331_B.jpg	[TX-0040] green boll, Tecoman Plot# 222, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_T12-222_IMG_0330_F.jpg	[TX-0040] flower, Tecoman Plot# 220, 2012	NCGC digital imaging (Tecoman, 2012)
TX-0040_CS09_IMG_1146_L.jpg	[TX-0040] leaf, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_1147_BO.jpg	[TX-0040] boll open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6111_LB.jpg	[TX-0040] leaf close up of the back surface, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6112_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_6488_FO.jpg	[TX-0040] flower open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09-1206_IMG_2615_LB.jpg	[TX-0040] leaf close up of the back surface, College Station Plot-1206, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05197_P.jpg	[TX-0040] whole plant, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05198_L.jpg	[TX-0040] leaf, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05199_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_DSC05200_BO.jpg	[TX-0040] boll open, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS09_IMG_1145_B.jpg	[TX-0040] green boll, College Station, 2009	NCGC digital imaging (College Station, 2009)
TX-0040_CS16-0605_5D3_8666_BO.JPG	[TX-0040] boll open, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_IMG_0207_L.JPG	[TX-0040] leaf, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_MG_5367_LB.JPG	[TX-0040] leaf close up of the back surface, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_MG_5368_ST.JPG	[TX-0040] stem, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4808_ST.JPG	[TX-0040] stem, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4807_BN.JPG	[TX-0040] boll showing nectaries, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4806_B.JPG	[TX-0040] green boll, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4805_FO.JPG	[TX-0040] flower open, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4804_B.JPG	[TX-0040] green boll, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)
TX-0040_CS16-0605_5D3_4803_F.JPG	[TX-0040] flower, College Station Plot-0605, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Total 62 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, T12	photoperiod	open bolls	MX_CLM_TCM_2012	222
2	NCGC germplasm evaluation, T12	plant shape	normal	MX_CLM_TCM_2012	222
3	NCGC germplasm evaluation, T12	plot maturity	less than half open	MX_CLM_TCM_2012	222
4	NCGC germplasm evaluation, T12	pollen color	yellow	MX_CLM_TCM_2012	222
5	NCGC germplasm evaluation, T12	stem color	sun red	MX_CLM_TCM_2012	222
6	NCGC germplasm evaluation, T12	stem gossypol glands	medium	MX_CLM_TCM_2012	222
7	NCGC germplasm evaluation, T12	trichome density on leaf	few	MX_CLM_TCM_2012	222
8	NCGC germplasm evaluation, T12	trichome density on stem	few	MX_CLM_TCM_2012	222
9	NCGC germplasm evaluation, T12	plant height (m)	1.07	MX_CLM_TCM_2012	222
10	NCGC germplasm evaluation, T12	leaf nectaries	three	MX_CLM_TCM_2012	222
11	NCGC germplasm evaluation, T12	plot plant stand	1 plant	MX_CLM_TCM_2012	222
12	NCGC germplasm evaluation, T12	productiveness	37-48 per plant	MX_CLM_TCM_2012	222

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	bnl2443	genetic_marker	154\|154	bnl2443_154; bnl2443_154
2	NCGC_SNTD_SSR_genotype_2015	bnl1495	genetic_marker	160\|160	bnl1495_160; bnl1495_160
3	NCGC_SNTD_SSR_genotype_2015	bnl2495	genetic_marker	191\|191	bnl2495_191; bnl2495_191
4	NCGC_SNTD_SSR_genotype_2015	gh283	genetic_marker	109\|109	gh283_109; gh283_109
5	NCGC_SNTD_SSR_genotype_2015	bnl3992	genetic_marker	146\|146	bnl3992_146; bnl3992_146
6	NCGC_SNTD_SSR_genotype_2015	bnl1531	genetic_marker	116\|121\|134	bnl1531_116; bnl1531_121; bnl1531_134
7	NCGC_SNTD_SSR_genotype_2015	bnl3644	genetic_marker	185\|190	bnl3644_185; bnl3644_190
8	NCGC_SNTD_SSR_genotype_2015	bnl3371	genetic_marker	168\|192	bnl3371_168; bnl3371_192
9	NCGC_SNTD_SSR_genotype_2015	nau2140	genetic_marker	129\|129	nau2140_129; nau2140_129
10	NCGC_SNTD_SSR_genotype_2015	dpl0135	genetic_marker	156\|176	dpl0135_156; dpl0135_176
11	NCGC_SNTD_SSR_genotype_2015	bnl0256	genetic_marker	182\|207\|209	bnl0256_182; bnl0256_207; bnl0256_209
12	NCGC_SNTD_SSR_genotype_2015	tmb0043	genetic_marker	173\|178	tmb0043_173; tmb0043_178
13	NCGC_SNTD_SSR_genotype_2015	bnl2960	genetic_marker	153\|153	bnl2960_153; bnl2960_153
14	NCGC_SNTD_SSR_genotype_2015	tmb0836	genetic_marker	199\|203	tmb0836_199; tmb0836_203
15	NCGC_SNTD_SSR_genotype_2015	bnl2681	genetic_marker	128\|160	bnl2681_128; bnl2681_160
16	NCGC_SNTD_SSR_genotype_2015	musb1015	genetic_marker	229\|304	musb1015_229; musb1015_304
17	NCGC_SNTD_SSR_genotype_2015	bnl3441	genetic_marker	210\|210	bnl3441_210; bnl3441_210
18	NCGC_SNTD_SSR_genotype_2015	bnl3580	genetic_marker	211\|211	bnl3580_211; bnl3580_211
19	NCGC_SNTD_SSR_genotype_2015	bnl1231	genetic_marker	196\|196	bnl1231_196; bnl1231_196
20	NCGC_SNTD_SSR_genotype_2015	bnl3594	genetic_marker	182\|238	bnl3594_182; bnl3594_238
21	NCGC_SNTD_SSR_genotype_2015	tmb1421	genetic_marker	180\|180	tmb1421_180; tmb1421_180
22	NCGC_SNTD_SSR_genotype_2015	bnl4061	genetic_marker	201\|203	bnl4061_201; bnl4061_203
23	NCGC_SNTD_SSR_genotype_2015	bnl3650	genetic_marker	346\|346	bnl3650_346; bnl3650_346
24	NCGC_SNTD_SSR_genotype_2015	bnl3474	genetic_marker	172\|180	bnl3474_172; bnl3474_180
25	NCGC_SNTD_SSR_genotype_2015	tmb0083	genetic_marker	206\|209	tmb0083_206; tmb0083_209

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	USDA_SNP0388	A/G	G
2	TAMU_SNP63K_genotype	USDA_SNP0391	A/G	G
3	TAMU_SNP63K_genotype	USDA_SNP0403	C/T	T
4	TAMU_SNP63K_genotype	USDA_SNP0405	C/T	Y
5	TAMU_SNP63K_genotype	USDA_SNP0406	A/G	G
6	TAMU_SNP63K_genotype	USDA_SNP0407	A/C	A
7	TAMU_SNP63K_genotype	USDA_SNP0413	G/T	T
8	TAMU_SNP63K_genotype	USDA_SNP0416	C/T	T
9	TAMU_SNP63K_genotype	USDA_SNP0418	A/G	G
10	TAMU_SNP63K_genotype	USDA_SNP0426	A/G	G
11	TAMU_SNP63K_genotype	USDA_SNP0432	A/G	A
12	TAMU_SNP63K_genotype	USDA_SNP0445	A/G	G
13	TAMU_SNP63K_genotype	USDA_SNP0453	A/C	C
14	TAMU_SNP63K_genotype	USDA_SNP0459	C/T	T
15	TAMU_SNP63K_genotype	USDA_SNP0460	A/C	A
16	TAMU_SNP63K_genotype	USDA_SNP0461	A/C	A
17	TAMU_SNP63K_genotype	USDA_SNP0462	A/C	M
18	TAMU_SNP63K_genotype	USDA_SNP0465	A/G	G
19	TAMU_SNP63K_genotype	USDA_SNP0471	A/C	C
20	TAMU_SNP63K_genotype	UCD_Gh_M_000019	T/C	T
21	TAMU_SNP63K_genotype	UCD_Gh_M_000022	C/A	A
22	TAMU_SNP63K_genotype	UCD_Gh_M_000024	C/T	T
23	TAMU_SNP63K_genotype	UCD_Gh_M_000089	A/G	A
24	TAMU_SNP63K_genotype	UCD_Gh_M_000093	G/A	A
25	TAMU_SNP63K_genotype	UCD_Gh_M_000096	T/C	C

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Last

Cross References

External references for this accession


Database	Accession
COLL_race	TX-0040
GRIN	PI 549150

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 549150	GRIN:
NCGC Cotton Race Collection (USA)	TX-0040

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