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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr26 | HAU2894 | HAU2894 | marker_locus | 80.26 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | NBRI_e1878 | NBRI_HQ527707 | marker_locus | 81.72 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | MGHES0044 | MGHES44 | marker_locus | 83.41 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_AAG/em_ATG | AAGATG-480 | marker_locus | 86.57 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | HAU-D5379 | HAU-D5379 | marker_locus | 89.04 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_ATT/em_TCT | ATTTCT-820 | marker_locus | 93.6 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_GGA/em_ATA | GGAATA-720 | marker_locus | 94.74 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | NAU2902 | NAU2902 | marker_locus | 95.07 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_CGC/em_ATT | CGCATT-1500 | marker_locus | 96.08 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | HAU1081 | HAU1081 | marker_locus | 96.1 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | BNL1669 | BNL1669 | marker_locus | 97.13 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | me_ATT/em_CCA | ATTCCA-1100 | marker_locus | 99.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | HAU-DJ-S128 | HAU-DJ-S128 | marker_locus | 100.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | DC40260 | MON_DC40260 | marker_locus | 106.58 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | CK987895-PR-ss | CK987895-PR-ss | marker_locus | 117.71 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | CGR6847 | MON_CGR6847 | marker_locus | 121.31 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | CGR5796 | MON_CGR5796 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | HAU1481 | HAU1481 | marker_locus | 10.79 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | CIR0017 | CIR017 | marker_locus | 15.16 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | me_GCT/em_ATA | GCTATA-150 | marker_locus | 20.14 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | me_AAT/em_ATA | AATATA-150 | marker_locus | 24.57 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | BNL2569 | BNL2569 | marker_locus | 27.96 cM |
DH962 X Ji Mian 5, F2 (2015).LG31 | me_GAC/em_ATA | GACATA-110 | marker_locus | 31.56 cM |
DH962 X Ji Mian 5, F2 (2015).LG36 | MUSS0233 | MUSS233 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).LG36 | HAU-DJ4985 | HAU-DJ4985 | marker_locus | 1.47 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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