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Marker Overview
Name | NAU2902 |
Genbank ID | CO084280 |
Type | SSR |
Species | Gossypium raimondii |
Source Type | EST |
Repeat Motif | (ag)13 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2902_F: GAAAATAAGAGCGGGCTATG |
Primer 2 | NAU2902_R: CATCAACATCTTGTCCCTGA |
Restriction Enzyme | NotI; EcoRV |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
Year | Publication |
2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch26_Dt.12 | N/A | 0.48 | NAU2902 | View |
2 | Yumian-1 x T586, RIL (2006) | AD_ch26_Dt.12 | N/A | 0 | NAU2902 | View |
3 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch12_At.12 | N/A | 105.6 | NAU2902 | View |
4 | Yumian-1 x T586, RIL (2015) | AD_ch26_Dt.12 | N/A | 27.4 | NAU2902 | View |
5 | Yumian-1 x 7235, RIL (2015) | AD_ch26_Dt.12 | N/A | 112.9 | NAU2902 | View |
6 | DH962 X Ji Mian 5, F2 (2015) | AD_ch26_Dt.12 | N/A | 95.07 | NAU2902 | View |
7 | DH962 x Ji Mian 5, RIL (2015) | AD_ch26_Dt.12 | N/A | 74.8 | NAU2902 | View |
8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch12_At.12 | N/A | 55 | NAU2902 | View |
9 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch26_Dt.12 | N/A | 109.8 | NAU2902 | View |
10 | Yumian-1 x T586, RIL (2009) | AD_ch26_Dt.12 | N/A | 50.4 | NAU2902/200t | View |
11 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch26_Dt.12 | N/A | 49.35 | NAU2902 | View |
12 | TM-1 x Hai-7124, BC1 (2012) | AD_ch26_Dt.12 | N/A | 20 | NAU2902-225 | View |
Sequence
>NAU2902 ID=NAU2902; Name=NAU2902; organism=Gossypium raimondii; type=genetic_marker; length=221bp GAAAATAAGAGCGGGCTATGGGGTTACAATAAGAAAGAGAGAGAGAGAGA GAGAGAGAGAGTTCATGAAAAAACGTAGAACCAGTAAAGGAAAACAACAG AGAAAGATTGAACAAGATGGGTCCTGCGCCTCAGAGTAGAGTTTATCATA AACCCAGAAAGGAGGATTTCACTGAGTACGGGAGACATGAGTCCTCAAAC ATCAGGGACAAGATGTTGATG
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