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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | DPL0741 | MON_DPL0741 | marker_locus | 69.3 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_GAC/em_GTC | GACGTC-400 | marker_locus | 69.55 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-D5205 | HAU-D5205 | marker_locus | 70.81 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CGT/em_AGT | CGTAGT-1100 | marker_locus | 71.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CAC/em_GTA | CACGTA-1000 | marker_locus | 72.33 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-J5644 | HAU-J5644 | marker_locus | 73.22 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CTG/em_GTG | CTGGTG-1400 | marker_locus | 73.62 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-D5120 | HAU-D5120-SSCP | marker_locus | 74.59 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ4952 | HAU-DJ4952 | marker_locus | 75.96 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | BNL4029 | BNL4029 | marker_locus | 76.63 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | DPL0864 | MON_DPL0864 | marker_locus | 79.38 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-D5181 | HAU-D5181-SSCP | marker_locus | 79.65 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ4941 | HAU-DJ4941 | marker_locus | 83.22 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | BNL1721 | BNL1721 | marker_locus | 84.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | BNL0272 | BNL272 | marker_locus | 84.53 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | BNL3806 | BNL3806 | marker_locus | 85.43 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ-S270 | HAU-DJ-S270 | marker_locus | 85.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CER0095 | MON_CER0095 | marker_locus | 86.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | TMB0313 | TMB0313 | marker_locus | 86.49 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CGR5860 | MON_CGR5860 | marker_locus | 91.15 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | BNL3558 | BNL3558 | marker_locus | 92.64 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | NAU6191 | NAU6191 | marker_locus | 93.29 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CGR6481 | MON_CGR6481 | marker_locus | 94.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | NBRI_gB005 | NBRI_HQ524339 | marker_locus | 95.7 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | me_CGT/em_AGT | CGTAGT-450 | marker_locus | 96.08 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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