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Map Overview
Name | DH962 X Ji Mian 5, F2 (2015) |
Species | Gossypium hirsutum
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Analysis method | composite interval mapping |
Software | MapChart V2.2, JoinMap V3.0, Windows QTL Cartographer 2.5 |
Map type | genetic |
Population type | F2 |
Genome group | AD |
Map unit | cM |
Maternal parent | DH962 |
Paternal parent | Ji Mian 5 |
Number of loci | 1235 |
Number of QTL | 36 |
Number of linkage groups | 55 |
Publication | [view all] |
Contact | Lin, Zhong-Xu
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Stock
Name | Type | Details |
DH962 X Ji Mian 5, F2 | population | Secondary id: | cdbpop_000139 | Pedigree: | DH962/Ji Mian 5 | Origin detail: | Hubei, China | Alias: | DJiM-F2 |
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Map Loci
This map contains 1,235 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | me_CGT/em_CGG | CGTCGG-1500 | marker_locus | 24.92 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | HAU-DJ4940 | HAU-DJ4940 | marker_locus | 26.18 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | HAU-DJ-I066 | HAU-DJ-I066 | marker_locus | 34.52 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | BNL0500 | BNL500 | marker_locus | 37.95 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | HAU1621 | HAU1621 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | HAU2033 | HAU2033 | marker_locus | 3.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | DPL0461 | DPL0461 | marker_locus | 5.36 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | CGR6514 | MON_CGR6514 | marker_locus | 7.24 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | CGR5447 | MON_CGR5447 | marker_locus | 8.12 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | S0282-600 | S282-600 | marker_locus | 9.05 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | BNL1513 | BNL1513 | marker_locus | 10.32 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | HAU-D5531 | HAU-D5531 | marker_locus | 11.28 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | SHIN-0612 | MON_SHIN-0612 | marker_locus | 13.3 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | S0512 | S512 | marker_locus | 15.04 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | HAU0254 | HAU0254 | marker_locus | 18.78 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-2 | me_GCA/em_TCC | GCATCC-1050 | marker_locus | 24.19 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-3 | CGR5423 | MON_CGR5423 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-3 | SHIN-1076 | MON_SHIN-1076 | marker_locus | 4.61 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU1382 | HAU1382 | marker_locus | 0 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ4960 | HAU-DJ4960 | marker_locus | 5.94 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CCRI0430 | CCRI430 | marker_locus | 10.28 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-D5202 | HAU-D5202-SSCP | marker_locus | 20.8 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ-I023 | HAU-DJ-I023 | marker_locus | 29.09 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | CGR6864 | MON_CGR6864 | marker_locus | 34.63 cM |
DH962 X Ji Mian 5, F2 (2015).chr25-1 | HAU-DJ-I029 | HAU-DJ-I029 | marker_locus | 46.33 cM |
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Map QTL
This map contains 36 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
DH962 X Ji Mian 5, F2 (2015).chr20 | qLY.DJiM-F2_chr20 | QTL | 36.88 cM | 41.21 cM | 38.89 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.1 | QTL | 5.41 cM | 6.82 cM | 6.42 cM |
DH962 X Ji Mian 5, F2 (2015).chr14-2 | qMIC.DJiM-F2_chr14-2.2 | QTL | 6.82 cM | 19.38 cM | 7.83 cM |
DH962 X Ji Mian 5, F2 (2015).chr21-3 | qMIC.DJiM-F2_chr21-3 | QTL | 0 cM | 27.86 cM | 15.01 cM |
DH962 X Ji Mian 5, F2 (2015).chr22 | qMIC.DJiM-F2_chr22 | QTL | 29.42 cM | 38.73 cM | 37.67 cM |
DH962 X Ji Mian 5, F2 (2015).chr24-1 | qMIC.DJiM-F2_chr24-1 | QTL | 17.36 cM | 23.04 cM | 21.48 cM |
DH962 X Ji Mian 5, F2 (2015).chr07-1 | qSI.DJiM-F2_chr07-1 | QTL | 51.78 cM | 60.95 cM | 56.88 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.1 | QTL | 47.85 cM | 48.34 cM | 48.14 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.2 | QTL | 51.65 cM | 52.55 cM | 52 cM |
DH962 X Ji Mian 5, F2 (2015).chr08 | qSI.DJiM-F2_chr08.3 | QTL | 52.78 cM | 53.43 cM | 53 cM |
DH962 X Ji Mian 5, F2 (2015).chr26 | qSI.DJiM-F2_chr26 | QTL | 14.84 cM | 25.28 cM | 17.92 cM |
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