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Marker Overview
| Name | CGR5423 |
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| Genbank ID | GQ393470 |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 33 B |
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| Source Type | genomic |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | CGR5423_F: AGAACCATTGCGGGTCATAG |
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| Primer 2 | CGR5423_R: GACCGGTTAGTGGAAATGGA |
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| Publication | [view all] |
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| Contact | Monsanto
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| Comment | Primer data obtained in 2009-05 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_519 | supercontig | CGR5423:1..533 .
scaffold_519:1834..2417 + |
| Chr4 | chromosome | CGR5423:1..533 .
Chr4:1118029..1118975 + |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | GX1135 x GX100-2, F2 (2013) | AD_ch24_Dt.08 | N/A | 56.8 | CGR5423 | View |
| 2 | GX1135 x GX100-2, RIL (2016) | AD_ch24_Dt.08 | N/A | 128.6 | CGR5423 | View |
| 3 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch24_Dt.08 | N/A | 149.5 | CGR5423 | View |
| 4 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch24_Dt.08 | N/A | 72 | CGR5423 | View |
| 5 | LMY28 x XLZ24, RIL (2018) | AD_ch24_Dt.08 | N/A | 44.41 | CGR5423 | View |
| 6 | Monsanto SSR Bin Map, (2009) | AD_ch24_Dt.08 | N/A | 0 | CGR5423 | View |
| 7 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch08_At.08 | N/A | 0 | MON_CGR5423 | View |
| 8 | DH962 X Ji Mian 5, F2 (2015) | AD_ch24_Dt.08 | N/A | 0 | MON_CGR5423 | View |
| 9 | DH962 x Ji Mian 5, RIL (2015) | AD_ch24_Dt.08 | N/A | 0 | MON_CGR5423 | View |
| 10 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch24_Dt.08 | N/A | 128.76 | CGR5423 | View |
| 11 | MGG-293-793, MAGIC (2018) | AD_ch24_Dt.08 | N/A | 11 | CGR5423 | View |
| 12 | TM-1 x Hai-7124, BC1 (2012) | AD_ch24_Dt.08 | N/A | 149.8 | cgr5423-520 | View |
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