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Map Overview
Name | CCRI-35 x Yumian-1, RIL (2015) |
Species | Gossypium hirsutum
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Software | JoinMap 4.0 |
Map type | genetic |
Population type | RIL |
Population size | 180 |
Genome group | AD |
Map unit | cM |
Maternal parent | Zhong Mian Suo 35 |
Paternal parent | Yumian-1 |
Population size | 180 |
Number of loci | 1273 |
Number of QTL | 79 |
Number of linkage groups | 26 |
Publication | [view all] |
Contact | Zhang, Zheng-Sheng
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Map Loci
This map contains 1,273 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | PGML0799 | PGML0799a | marker_locus | 0 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | MUSB0537 | MUSB0537 | marker_locus | 17.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | CER0024 | CER0024 | marker_locus | 21.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU2437 | NAU2437b | marker_locus | 26.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU3901 | NAU3901b | marker_locus | 28.9 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | DPL0526 | DPL0526 | marker_locus | 32 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | PGML4823 | PGML4823 | marker_locus | 38.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | PGML1137 | PGML1137 | marker_locus | 45.9 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NBRI_1855 | NBRI1855 | marker_locus | 53.1 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | SHIN-1397 | SHIN1397 | marker_locus | 62.9 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | DPL0346 | DPL0346 | marker_locus | 63.3 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | CGR5282 | CGR5282 | marker_locus | 63.7 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NBRI_1102 | NBRI1102 | marker_locus | 69 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | CGR6078 | CGR6078 | marker_locus | 69.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU2901 | nau2901 | marker_locus | 71.2 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | PGML3082 | PGML3082 | marker_locus | 71.8 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NBRI_1079 | NBRI1079 | marker_locus | 73.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NBRI_0018 | NBRI0018 | marker_locus | 74.2 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | BNL1693 | BNL1693 | marker_locus | 75.7 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | CGR6856 | CGR6856 | marker_locus | 83.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU2741 | nau2741 | marker_locus | 93.8 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | HAU2138 | HAU2138 | marker_locus | 101.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU5411 | NAU5411a | marker_locus | 102.2 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | NAU5163 | NAU5163 | marker_locus | 104.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | CGR6378 | CGR6378 | marker_locus | 109.7 cM |
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Map QTL
This map contains 79 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr01 | qFEL.CY-RIL_ch01.swu11 | QTL | 29.5 cM | 34.5 cM | 32 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr11 | qFEL.CY-RIL_ch11.swu11 | QTL | 87.9 cM | 92.9 cM | 90.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr15 | qFEL.CY-RIL_ch15.swu10 | QTL | 95.5 cM | 100.5 cM | 98 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr16 | qFEL.CY-RIL_ch16.swu11 | QTL | 213.9 cM | 218.9 cM | 216.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr16 | qFEL.CY-RIL_ch16.swu12 | QTL | 51 cM | 56 cM | 53.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr18 | qFEL.CY-RIL_ch18.swu12 | QTL | 62.1 cM | 67.1 cM | 64.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr22 | qFEL.CY-RIL_ch22.swu11 | QTL | 91.1 cM | 96.1 cM | 93.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr24 | qFEL.CY-RIL_ch24.swu10 | QTL | 45.7 cM | 50.7 cM | 48.2 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr25 | qFEL.CY-RIL_ch25.swu08 | QTL | 49.7 cM | 54.7 cM | 52.2 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr07 | qFEL.CY-RIL_ch07.swu12 | QTL | 39.9 cM | 44.9 cM | 42.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr11 | qFS.CY-RIL_ch11.swu11 | QTL | 83.2 cM | 88.2 cM | 85.7 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr14 | qFS.CY-RIL_ch14.swu09 | QTL | 70.5 cM | 75.5 cM | 73 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr14 | qFS.CY-RIL_ch14.swu10 | QTL | 48.9 cM | 53.9 cM | 51.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr14 | qFS.CY-RIL_ch14.swu11 | QTL | 48.9 cM | 53.9 cM | 51.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr16 | qFS.CY-RIL_ch16.swu08 | QTL | 21.6 cM | 26.6 cM | 24.1 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr16 | qFS.CY-RIL_ch16.swu11 | QTL | 213.9 cM | 218.9 cM | 216.4 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr18 | qFS.CY-RIL_ch18.swu12 | QTL | 62.1 cM | 67.1 cM | 64.6 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr02 | qFS.CY-RIL_ch02.swu08 | QTL | 56.4 cM | 61.4 cM | 58.9 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr23 | qFS.CY-RIL_ch23.swu12 | QTL | 8 cM | 13 cM | 10.5 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr05 | qFS.CY-RIL_ch05.swu08 | QTL | 71.8 cM | 76.8 cM | 74.3 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr05 | qFS.CY-RIL_ch05.swu12 | QTL | 71.8 cM | 76.8 cM | 74.3 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr07 | qFS.CY-RIL_ch07.swu08 | QTL | 37.5 cM | 42.5 cM | 40 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr07 | qFS.CY-RIL_ch07.swu09 | QTL | 38.2 cM | 43.2 cM | 40.7 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr07 | qFS.CY-RIL_ch07.swu10 | QTL | 36.2 cM | 41.2 cM | 38.7 cM |
CCRI-35 x Yumian-1, RIL (2015).CY-RIL_chr07 | qFS.CY-RIL_ch07.swu11 | QTL | 37.5 cM | 42.5 cM | 40 cM |
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Stock
Name | Type | Details |
CCRI-35 x Yumian-1, RIL | population | Secondary id: | cdbpop_000164 | Pedigree: | CCRI-35 x Yumian-1, F2:6 | Origin detail: | China | Population size: | 180 | Alias: | CY-RIL |
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Publication
Year | Publications |
2015 | Tan Z, Fang X, Tang S, Zhang J, Liu D, Teng Z, Li L, Ni H, Zheng F, Liu D, Zhang T, Paterson AH, Zhang Z. Genetic map and QTL controlling fiber quality traits in upland cotton (Gossypium hirsutum L.). Euphytica. 2015; 203:615–628. |
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